Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_3459 |
Symbol | |
ID | 6139507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 3673076 |
End bp | 3675046 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641629166 |
Product | 1-deoxy-D-xylulose-5-phosphate synthase |
Protein accession | YP_001756119 |
Protein GI | 229597237 |
COG category | [H] Coenzyme transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.841301 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCACTCT CCCCTGAGCA ATCGGCGTTG CTGGACCGCG TTCCGTCTCC ATCGGCGCTT CGGCGTCTTC CGGAGTCGGA GCTTCAGGCG GTGGCGGACG CGGTGCGCGC CGAGATGATC GACGCGGTCT CGATCACCGG CGGCCATCTC GGCTCGGGGC TGGGCGTGGT CGAGCTGACG GTGGCGCTGC ACCACGTGTT CGACACCCCC GACGACCGCA TCGTCTGGGA CGTCGGCCAC CAGTGCTACC CCCACAAGAT CCTCACCGAG CGCCGCGACC GGATCCGCAC GCTGCGCCAG GGCGGCGGCC TGTCGGGCTT CACCAAGCGG AGCGAGAGCG TCTACGATCC CTTCGGCGCC GCCCACTCCT CGACCTCGAT CTCGGCCGCG CTGGGCATGG CGGTCGCCCG CGACCTCGAC AACGCCACCG CCAAGCAGAA GGGCGGCGCG CAGAAGCGCC GCAACGCCAT CGCGGTGATC GGCGACGGCT CGATGTCGGC CGGCATGGCC TACGAGGCCC TCAACAACGC CGGCGCCCTG CACTCGCGCC TGATCGTCAT CCTCAACGAC AACGACATGT CGATCGCGCC CCCCGTCGGC GCCATGTCGG CCTACCTCGC CAGGCTGGCG TCGGGTGGCG CCTACCAGTC CCTGCGCGAG ACCGCCAAGC AGCTCGGCAA GCTCCTGCCC AAGGCGCTCT ACCAGCGCGC CGCCGCGGCC GAGGAGTACG CCCGCTCGCT GGTGGTCGGC GGCGGCACCA TGTTCGAGGA GATGGGCTTC CACTACGTCG GCCCCGTCGA CGGGCACAAC CTCGACCACC TGCTGCCGGT GCTCAAGAAC GTCCGCGACG CCGAGCACGG CCCGATCCTG CTCCACGTCG TCACCCAGAA GGGCAAGGGC TACGCGCCGG CCGAGGCCTC GGCCGACCGC TACCACGGCG TGGTCAAGTT CGACGTGGTC TCAGGGATCC AGGCCAAGGC CAAGCCGAAC GCGCCGGCCT ACACGCGGGT GTTCGGCGAG AGCCTGATCA AGGCGGCCGA CGCCGACGAC AAGGTCGTGG CGATCACCGC CGCCATGCCG GGCGGGACCG GCATCGACCT GTTCGGCAAG GCGCACCCGG ACAAGACCTT CGACGTGGGC ATCGCCGAGC AGCACGCGGT GACGTTCGCG GGCGGTCTGG CGACCGAGGG CTACCGGCCG TTCGTGGCGA TCTACTCGAC CTTCCTGCAG CGGGCCTACG ACCAGGTGGT GCACGACGTG GCGCTGCAGA ACCTGCCCGT GCGGTTCTGC CTGGACCGGG CGGGCCTGGT CGGCGCGGAC GGGGCGACGC ACGCGGGCGC GTTCGACCTG GCGTACCTGT GCTGCCTGCC GAACATGACC GTGATGGCGG CGGCCGACGA GGCCGAGCTG GTGCACATGG TGGCGACCGC CCACGCCCAC GACACGGGCC CGATCGCGCT GCGCTACCCG CGCGGCGAGG GGGTGGGCGT CGAGCTTCCG GAGCGGGGCG AGGTCCTGGC GATCGGCAAG GGCCGGGTGG TGCGCCGGGA CGCGGAGGCG CGGGTGGCGC TCCTGTCGCT CGGCACGCGT CTGGCGGAGG CCTTGAAGGC GGCGGACGCG CTGGCCGAGC AGGGCGTGGC GGTGACGGTG GCGGACGCGC GGTTCGCCAA GCCGCTGGAC GAGGCGCTGA TCCTGGATCT GGCGCGCGAC CACGAGGTGC TGATCACGGT GGAGGAGGGC TCGCGGGGCG GGTTCGGCGC GATGGTGCTG CACCTGCTGG CCGAGCGCGG CGCGCTGGAC GCGGGCGGCG TGCGGGTGCG GACCATGACG CTGCCGGACG CCTACCAGGA CCACGACAGC CCGGAGAAGA TGTACGCCGA GGCAGGCCTC GACGCCAAAA CCATCGTCCG GACCGCCCTC GACACACTGC CCGAGCGGAA GGACAGCCGG TCGCGCCTGC GGCTCGCCTG A
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Protein sequence | MALSPEQSAL LDRVPSPSAL RRLPESELQA VADAVRAEMI DAVSITGGHL GSGLGVVELT VALHHVFDTP DDRIVWDVGH QCYPHKILTE RRDRIRTLRQ GGGLSGFTKR SESVYDPFGA AHSSTSISAA LGMAVARDLD NATAKQKGGA QKRRNAIAVI GDGSMSAGMA YEALNNAGAL HSRLIVILND NDMSIAPPVG AMSAYLARLA SGGAYQSLRE TAKQLGKLLP KALYQRAAAA EEYARSLVVG GGTMFEEMGF HYVGPVDGHN LDHLLPVLKN VRDAEHGPIL LHVVTQKGKG YAPAEASADR YHGVVKFDVV SGIQAKAKPN APAYTRVFGE SLIKAADADD KVVAITAAMP GGTGIDLFGK AHPDKTFDVG IAEQHAVTFA GGLATEGYRP FVAIYSTFLQ RAYDQVVHDV ALQNLPVRFC LDRAGLVGAD GATHAGAFDL AYLCCLPNMT VMAAADEAEL VHMVATAHAH DTGPIALRYP RGEGVGVELP ERGEVLAIGK GRVVRRDAEA RVALLSLGTR LAEALKAADA LAEQGVAVTV ADARFAKPLD EALILDLARD HEVLITVEEG SRGGFGAMVL HLLAERGALD AGGVRVRTMT LPDAYQDHDS PEKMYAEAGL DAKTIVRTAL DTLPERKDSR SRLRLA
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