Gene Mrad2831_3388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3388 
Symbol 
ID6139436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3598584 
End bp3599300 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content72% 
IMG OID641629096 
ProductLrgB family protein 
Protein accessionYP_001756049 
Protein GI170749789 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0600848 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCGGCG ACTTCTCGCT CTGGGTCTAC CTCGCCAAGA CGCCGCTCCT GTGGCTCACC 
GTGACGCTGA CCGCCTACGT CCTGGCGGAC CGGATCGCCG CCGCGACCGG CCGGCACCCG
ATCGCCAACC CCGTCCTCAT CACGGTCGTC CTGGTCGGGG CGGTCCTGGC CATCACCGGC
ACGCCCTACG GGGCCTATTT CGAGGGCGCG CAGTTCGTCC ACTTCCTGCT CGGACCCGCC
ACCGTGGTTC TGGCGATGCC CCTCTACGAG CGGCGGGCGA CCGTCCTGCG TGCCCTCGCG
CCCATGCTGG CGGCCCTCGC GGCCGGCTCG GCCACCACCC TCGCCGTGGT GATCGGCCTC
GCGCGGCTCC TCGACATCCC GCAGCCGATC CTCGTCTCGC TGGCGCCGAA ATCGGTGACC
TCGGGCGTGG CGATGGGCAT CGCTGAGGCG CTCGGCGGCG ACCCGACGCT CACGGCGATC
CTGGTGATCC TCACCGGCAT CATCGGGGCG ATCCTCGTGA CGCCGATGAT GAACCTCCTG
CGGATCAGCG ACATGCGCGC CCGCGGCTTC GCGGCCGGGC TCGCGGCCCA CGGCATCGGG
ACGGCCCGCG CCTTCCAGGT CAGCGAGGTC GCCGGCACCT TCGCGGGCAT CGCCATGGGG
CTCAACGCCT TCCTGACGGC GGTCCTCGCG CCCCTGGCGC TGCACCTGCT GTTCTGA
 
Protein sequence
MGGDFSLWVY LAKTPLLWLT VTLTAYVLAD RIAAATGRHP IANPVLITVV LVGAVLAITG 
TPYGAYFEGA QFVHFLLGPA TVVLAMPLYE RRATVLRALA PMLAALAAGS ATTLAVVIGL
ARLLDIPQPI LVSLAPKSVT SGVAMGIAEA LGGDPTLTAI LVILTGIIGA ILVTPMMNLL
RISDMRARGF AAGLAAHGIG TARAFQVSEV AGTFAGIAMG LNAFLTAVLA PLALHLLF