Gene Mrad2831_3015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3015 
Symbol 
ID6139060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3171388 
End bp3173721 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content69% 
IMG OID641628727 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001755682 
Protein GI170749422 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.392311 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATTT CTTTCCTGAT CGATACCGAT CGCAAGGCGG ATCCACTCGA CGCGAACCTT 
CGCGCGCGCG CCCGCGTCGA GCAGCTGGAC GTCGCGCTGC GCTTGGTACC CTTCACGATT
CTTGTGAGTC TCAGCGTCGT ACAGGTCATC GTCTACCTGT TCTGGAACCC GGCCAATCGC
GCCTATCTCG CCGGTCTCGA AACGCTCATC CTGCCGCTGG CGGTGGTCTC GCTCCAGCAG
TGCTGGCGCT GGCGCTCCCG TCCCAAGCCG CTCCAGGTGC CGTCGTCGTT CGTGCAGGGC
GTCGTGCTGG CCGCGCAGGC CTACGGGTTT CTCCTGGCCT CCATCCCGGT CATGCTCTTC
TCCGGCGCCG ACGCGCACGG GCGGCTGCTG ATCGCCTCCA GCATCGCGGG CCTGATCGCG
ACCGGCATGA GCGCGGCGGT GCTGCCGCGG GTCGCCATCG GCTATTCCGG CCTGATCATC
CTCGGCTCGT TCATCGCCCT CGCGACGACC GGGGAGGCCT TCTACATCTA CGTCGCGGTC
CTGCTGTTCT TCTACGCGAT CTTCATCTGC TTCACGATCC TGCATCTGAG CCGGCTCCTG
ACGATGCGGG TCATCGCGCA GATCGAGCTG GAACGGCAGC AGGAGTTCAC CCACCTCCTG
CTCAACGAGT TCGAGGAGAG CGCCAGCGAC TGGCTCTGGG AGACCGATGC CGACCTGCGC
CTCCAGCACG TCTCGCCGCG CCTGATCGAG GTCGCCGGCT CCTCCGAGCG CCAGCTGATG
GGCCTGCCGC TGGAGCGGCT GCTGCTGCCG CCGGTGGCGC CGCCCAGGAG CCACTCGAGC
ACCACCCTCT GGAGCTGCAT CGCCGAGCGG CGGGCCTTCC GGAACCTGCA CCTGCAGCTC
GATATCGCCG GCGAGCGGCG GACTTGGTGC CTCAGCGGGA AGCCGACCTT CGACCGGGCC
GGCGCCTTCT CGGGTTACCG CGGCGTCGGC TCGGACGTGA CGGAGAAGCG GCGCTCCGAG
GAGCGCCTGT CCTATCTCGC TCTGCACGAT TCCCTGACGG ATCTGCCCAA CCGGGTCCTG
TTCCACCAGC TCCAGGAAGC GGCGCGGGAA CGGCTCGCGC AGGGCGATCG GTTCGCCGTG
CTGGCCCTCG ACCTCGACGA GTTCAAGAGC GTCAACGACA CGTTCGGCCA CGCGGCCGGC
GACAAGCTCC TGAAGTCGGT CGCCGAGCGG CTCCGGAGCT TCGAGGCCTC CGATGTCCAG
CTCGCCCGCC TCGCGGGCGA CGAGTTCGCG GTCCTCGCCA CCGGCCGGAG CGCCCGGGAC
CTGCACGCGA TCGAGGCGCT CGCCAACGGC ATCGTGGAGG CGCTCGCGTC GCCGTTCACC
ATCGACGGCA TCCGGCTGAC CGTCAGCGTC AGCATCGGGA TCGCGATCGC TCCGCAGGAC
GGTTGCCAGG AGATCATGCG GCGCGCCGAT CTCGCGCTCT ACCGCATGAA GAGCGAGGGC
CGGAACGGCT ACCGCTTCTA CGAGGCCGAG ATGGACGAGC GGATCGAGGC CCGCCGCGCC
CTGACGGCCG ATCTGCGGGG CGCCCTCGAT CGGGACGAGT TCGTCCTCTA CTTCCAGCCG
ATCGTGGCGG CCAAGGAGTG CCGCGTGCGC GGCTTCGAGG CGCTGATCCG GTGGAAGCAC
CCGGTGCGCG GCTTCGTCTC GCCCGGCGAG TTCATCCCCC TCGCCGAGGA GACCGGGGTG
ATCATACCGC TGGGCGAGTG GATCCTGCGG GAGGCATGCC GGATCGCGGC CGGCTGGCCG
GGGGATGTCC GCATCGCCGT CAACCTGTCC CCGCGGCAGT TCCGGCACTC GGACCTGACC
CAGCTCGTCC GGTCCGCCCT GCGCACGAGC GGGCTGGCCG CCGCGCGCCT GGAGCTCGAG
GTGACCGAGT CGGTGTTCCT GGAGGCCACG CCGGCGATCA ACGCCACGCT CTCGAAACTG
CGCGAGATGG GCGTGCGGCT GTCGCTCGAC GATTTCGGAA CCGGCTATTC GAGCTTGAGC
TACCTGCGCC GGATCGCCTT CGACAAGATC AAGATCGACC AGAGCTTCGT CCGGGACCTG
CCGCAGGAGC GCGGCGCGGC GGCGATCGTG AGCGCGATCA TCGACATGGC GACGAGTCTC
GACATGACCA TCACCGCCGA GGGCGTGGAG ACGGACGCGC AGCGCGCCTG CCTGCTGGAG
CAGGGCTGCC ACGAATTCCA GGGCTACCTG TTCAGCAAGC CGCTGCCGGC CGAGCAGGCC
GCGGCGCTGG CGCGCAGCCG TCAGCTCCTC CCGGCGGCGG TCCGGGCGGC GTGA
 
Protein sequence
MLISFLIDTD RKADPLDANL RARARVEQLD VALRLVPFTI LVSLSVVQVI VYLFWNPANR 
AYLAGLETLI LPLAVVSLQQ CWRWRSRPKP LQVPSSFVQG VVLAAQAYGF LLASIPVMLF
SGADAHGRLL IASSIAGLIA TGMSAAVLPR VAIGYSGLII LGSFIALATT GEAFYIYVAV
LLFFYAIFIC FTILHLSRLL TMRVIAQIEL ERQQEFTHLL LNEFEESASD WLWETDADLR
LQHVSPRLIE VAGSSERQLM GLPLERLLLP PVAPPRSHSS TTLWSCIAER RAFRNLHLQL
DIAGERRTWC LSGKPTFDRA GAFSGYRGVG SDVTEKRRSE ERLSYLALHD SLTDLPNRVL
FHQLQEAARE RLAQGDRFAV LALDLDEFKS VNDTFGHAAG DKLLKSVAER LRSFEASDVQ
LARLAGDEFA VLATGRSARD LHAIEALANG IVEALASPFT IDGIRLTVSV SIGIAIAPQD
GCQEIMRRAD LALYRMKSEG RNGYRFYEAE MDERIEARRA LTADLRGALD RDEFVLYFQP
IVAAKECRVR GFEALIRWKH PVRGFVSPGE FIPLAEETGV IIPLGEWILR EACRIAAGWP
GDVRIAVNLS PRQFRHSDLT QLVRSALRTS GLAAARLELE VTESVFLEAT PAINATLSKL
REMGVRLSLD DFGTGYSSLS YLRRIAFDKI KIDQSFVRDL PQERGAAAIV SAIIDMATSL
DMTITAEGVE TDAQRACLLE QGCHEFQGYL FSKPLPAEQA AALARSRQLL PAAVRAA