Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_2578 |
Symbol | |
ID | 6138620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 2735076 |
End bp | 2736659 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641628291 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001755249 |
Protein GI | 170748989 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.376758 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCATG CGGGCCCACC TCCGGGCGGC ACGATGGAGA TGAGAGACCC GGCCGGTCCG CATCCGGGCG CGGGCATGCC GTTGGGCGCC GAGGATCTCC GGAACATCCT CGACGAGGCG GGCATCTGCA CCTGGGTGCT CGACATCCCG TCCGGGCGCA CCATCGTCTC GCCGACCTGT GCACGGCTAT TTGGGGTCCC GGTCGAGGAC CTGACCAGCT TCGCGGCGAC ACAGGCCCTC GTACACCCCG ACGACCGGGA GGCCAGGGCG CAGGCCATCC GGCACGCGTT GGAGCACGGC GGGAGCTACG AGGTCGATTA CCGCGTGGTG CGTCCCGACG GGCAGGTCCA TTGGCTGCGC TCGCGCGGCA CCGTGCAGGT CGGCCCGGAC GGGAAGCCGT GCGGCCACCG CGGCGTGGTC ACGAGCATCC ACGCGCAGCG GCAGGCCGAC GAAGATCTGC GCGCGCGCGA GGCGCACCTG CGCTCGATCC TGGAGACCGT GCCCGACGCC ATGGTCGTCA TCGACGAACA GGCCCGGATC AAGTCATTCA GTGCTGCCGC CGTGCGCCAG TTCGGCTACG CGGAGGAGGA CGTCGCCGGC CGCAACGTCA GCCTGCTCAT GCCCGAGCCC TACCGGACGC AGCACGACGC CTACATGGCC CGCTACCTCT CCACGGGCGA GCGGCGCATC ATCGGCATCG GCCGCGTCGT CGTCGGCCAG CGCAAGGATG GCTCGACCTT CCCGATGGAA CTCTCGGTCG GCGAGATGCG CTCGGGCGGC GAGCGCTACT TCACCGGCTT CATCCGCGAC CTAACCGAAC GGCGACAGAC GGAAACGCGC CTGCAGGAAC TCCAGTCCGA GCTCGTCCAC ATGTCGCGCT TCACCGCGCT CGGCGAGATG GCCTCGACGC TGGCCCATGA GATTAACCAA CCGCTCACCG CCATCGCGAG CTACTTGAAG GGATGCCGGC GCCTCCTCTC CCGCATGGAG GGCGCGGAGG TGCTCAAGCT TTCGGATGCC GTGAACGAGG CGGCCGACCA AGCGCTGCGG GCCGGGCAGG TCATCCGGCA TCTGCGCGAG TTCGTGACCC GCGGCGAGGG CGAACGGCAC ATCGAGGGCT TGCCCAAGCT CATCGAGGAG GCGAGCGCGC TTGCCCTGGT CGGCGCCCGG GAGAAGGGCG TGCACGTCAC CTTCGCGCTC GATCCTGCGG CCCCGCTGGT CCTGGCCGAC CGCATCCAGG TGCAGCAGGT GCTGCTCAAC CTCATCCGTA ACGCCATTGA GGCCATGCAG GGCGAGCCGC GGCGCGAGCT GGTCGTCGCG ACCCGGGCTC TGCCGGTCGA CGGCCTCGTC GAGGTGCAGG TGTCGGATAC CGGGAGCGGC ATCGCGCCGG ACGTGGCCGC GCAGCTTTTC CAGCCCTTCG TCACCACGAA AGCGAACGGC ATGGGCGTCG GCCTCTCGAT CTGCCGCACC ATCGTCGAGG CGCACGGTGG CAGGATCTCG GCGGGACCCG GCCCGGACGG CGGTACGGAG TTCCGGTTCA CCCTGCGCGC GGTCGACCGG AAGGAGATGG ATCATGTCCG ATGA
|
Protein sequence | MAHAGPPPGG TMEMRDPAGP HPGAGMPLGA EDLRNILDEA GICTWVLDIP SGRTIVSPTC ARLFGVPVED LTSFAATQAL VHPDDREARA QAIRHALEHG GSYEVDYRVV RPDGQVHWLR SRGTVQVGPD GKPCGHRGVV TSIHAQRQAD EDLRAREAHL RSILETVPDA MVVIDEQARI KSFSAAAVRQ FGYAEEDVAG RNVSLLMPEP YRTQHDAYMA RYLSTGERRI IGIGRVVVGQ RKDGSTFPME LSVGEMRSGG ERYFTGFIRD LTERRQTETR LQELQSELVH MSRFTALGEM ASTLAHEINQ PLTAIASYLK GCRRLLSRME GAEVLKLSDA VNEAADQALR AGQVIRHLRE FVTRGEGERH IEGLPKLIEE ASALALVGAR EKGVHVTFAL DPAAPLVLAD RIQVQQVLLN LIRNAIEAMQ GEPRRELVVA TRALPVDGLV EVQVSDTGSG IAPDVAAQLF QPFVTTKANG MGVGLSICRT IVEAHGGRIS AGPGPDGGTE FRFTLRAVDR KEMDHVR
|
| |