| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2276 |
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| Symbol | |
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| ID | 6138308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 2406924 |
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| End bp | 2408528 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641627986 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001754954 |
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| Protein GI | 170748694 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.394363 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCGCT TCTCCCGTGC GAAGATCATC GCGACACTGG GTCTGATCCT GGTGGGGCTG
ACGCTCGCCG TGCCGAGCTT CTTCTCGCCC GAGCAGCGCA AGAGCTTCGT TGCCGGCCTG
CCCTCCTGGT TCCCCAGCTG GGTCGTGCCG ACGCGCGCCA TCGTGCTCGG CCTCGACCTG
CAGGGCGGCT CGCAGCTCCT GCTCGAGGTG GACCAGAACG AGCTCATCGC CTCGCAGGCC
AAGGCGCTGC GCGACGACGT GCGCCGCGTG CTCCAGCAGG AGAATGTCCG CGCCGACGGC
GGCATCGGCC TGCTCCAGCG CGGCGTCCAG GTGAAGATCG ACGACGCCGC CGCCCGGGCC
AAGGTCCTGC CGAAGCTCCA GGAGCTGTCG CAGCCGATCA CCACCTCCCT GGGCCAGACG
GCGGCCCGCA CCCTCGACGT CTCCGAGCAG CCCGGCGGCG TGATCCGCCT GACCCTCACC
GATGCCGGCA TCACCGACCG GACCCGCCGA GCCGTGAGCC AGGGCATCGA GGTCATCCGG
CGCCGCCTCG ATTCCACCGG CACCACCGAG CCGTCGATCC AGCAGCAGGG CGCCGACCGG
ATCCTGATCC AGGTGCCGGG CGAGCAGAAC CCGGAGCGCC TCGAGAAGCT CCTCGGCTCC
ACCGCCAAGC TGGAGTTCCG CATGCTCGCC GACAGCCCCT CGGGCGACGT CGACATGCTG
CCCTCCAAGG ACGAGAAGGG CGCCAAGGTC CCGGTGGAGC GCCGGGTCAT GGCCGACGGC
GGCGAGCTGA CCGACGCGCA GCCGGCCTTC GACCAGCAGA CCCACGAGCC GATGGTGAGC
TTCAAGTTCA ACCTGCGCGG CGCGCAGCGC TTCGGGCAGG CGACCTCGGA GAATATCGGC
CGACGCATGG CGATCGTCCT CGACAACGAG GTCGTGTCGG CGCCCGTGAT CCGCTCGGCG
ATCACCGGCG GCTCGGGCCA GATCACCGGC AACTTCACCG TGCAGCAGGC CAACGACCTG
GCGGTCCTGC TGCGCGCCGG CGCGCTGCCG GCGAAGTTCA CCGTGGTCGA GCGCCGCGTC
GTCGGCCCGG GTCTCGGCCG CGACTCCATC GAGGCCGGCA AGCTCGCGAC CCTGGTGGCG
GCGGGCCTCG TGGTGGCCTT CATGTTCGCG ACCTACGGGA CGTTCGGCTT CATCGCCAAC
ATCGCCCTCA TGGTCCATGT CGGGCTGATC CTGGGCCTGA TGTCGGTGCT AGAGGCGACC
ATGACGCTCC CGGGCATCGC CGGCATCGTG CTCACCATCG GCACGGCGGT GGATTCGAAC
GTGCTGATCT ACGAGCGCAT GCGCGAGGAG CAGCGGGCCG GCCGCTCGCT GATCTCGGCG
CTGCAGGCGG GCTTCGACCG GGCCTTCGCC ACCATCATCG ACTCGAACTC GACCATGGCG
ATCGCCGCCC TGATCCTGTT CTTCCTCGGC TCGGGCCCGG TGAAGGGCTT CGCCGTGGTC
TTCATCCTCG GCATCCTCAC CACGGTCATC ACCGCGGTGA CGCTGACCCG GATGATGATC
GCGGTGTGGT ACAACACGTT CCGGCCGAAG ACCCTGCCGT TCTGA
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| Protein sequence | MLRFSRAKII ATLGLILVGL TLAVPSFFSP EQRKSFVAGL PSWFPSWVVP TRAIVLGLDL
QGGSQLLLEV DQNELIASQA KALRDDVRRV LQQENVRADG GIGLLQRGVQ VKIDDAAARA
KVLPKLQELS QPITTSLGQT AARTLDVSEQ PGGVIRLTLT DAGITDRTRR AVSQGIEVIR
RRLDSTGTTE PSIQQQGADR ILIQVPGEQN PERLEKLLGS TAKLEFRMLA DSPSGDVDML
PSKDEKGAKV PVERRVMADG GELTDAQPAF DQQTHEPMVS FKFNLRGAQR FGQATSENIG
RRMAIVLDNE VVSAPVIRSA ITGGSGQITG NFTVQQANDL AVLLRAGALP AKFTVVERRV
VGPGLGRDSI EAGKLATLVA AGLVVAFMFA TYGTFGFIAN IALMVHVGLI LGLMSVLEAT
MTLPGIAGIV LTIGTAVDSN VLIYERMREE QRAGRSLISA LQAGFDRAFA TIIDSNSTMA
IAALILFFLG SGPVKGFAVV FILGILTTVI TAVTLTRMMI AVWYNTFRPK TLPF
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