Gene Mrad2831_2078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_2078 
Symbol 
ID6138109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2208728 
End bp2209477 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content70% 
IMG OID641627787 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001754756 
Protein GI170748496 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0849144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGAAC TCTCGCTCGA CGCCGATACA ATCGACGCGC AGGGCCCCCG GCTCCCCGAC 
AGCGTGCAGT ATCATCTCGG CCATCTGCTC GCGGCGACCT ACGCGCAGGA CAACGTCGAG
CCGACCATCG CGGATCGCTT CGCCGAATTG CTGAGGCTGC TCGACGGCGC TTTCGGCCGG
GCGCAGGACG GCCGCGAGAA GGCGTTCCAG GCCTCGCTCC TCGCGATGGT GCCGAACCTG
CAGCGCTTCG CGCGCTCGCT CCTGCGCAGC CATGTCGGTG CCGACGACCT CCTCCAGAAC
ACGCTTCTCC GGGCCTGGCG CTCGCGCGCC AGCTTCGCGC CGGGCACGAA CCTGGAAGCG
TGGCTGTTCA CGATCATGCG CAACCAGTTC TACAACGAGC ACCGCAAGCG CGGGCGCGAG
GTGCAGGACG AGGACGGCGC GCAGGCGGAG CGGATGGTCT CGCTGCCCGA GCAGGGCGGC
CACCTCGATC TGAGCGACGT CCAAGCCGCC CTCGACCGCC TGGCGCCGCC GATGCGGCAG
GCGCTCGTGC TCGTGGCGAT CGAGAACCTC ACCTACGAGG AGACCGCGGC CGTCATGCAG
TGCCGGATCG GCACGGTGAA GAGCCGGGTC TGGCGGGCCC GGACGCAGCT CGCCGAGATG
CTGGGCTATA CCGGTCTCGA GGTCGGCAGC GACGACGTCA TGCTGGCCGC CGCGGGGCCG
AAGGGGCGGA AATCCACCGC TGTCTCGTGA
 
Protein sequence
MLELSLDADT IDAQGPRLPD SVQYHLGHLL AATYAQDNVE PTIADRFAEL LRLLDGAFGR 
AQDGREKAFQ ASLLAMVPNL QRFARSLLRS HVGADDLLQN TLLRAWRSRA SFAPGTNLEA
WLFTIMRNQF YNEHRKRGRE VQDEDGAQAE RMVSLPEQGG HLDLSDVQAA LDRLAPPMRQ
ALVLVAIENL TYEETAAVMQ CRIGTVKSRV WRARTQLAEM LGYTGLEVGS DDVMLAAAGP
KGRKSTAVS