| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2009 |
|---|
| Symbol | |
|---|
| ID | 6138038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2133888 |
|---|
| End bp | 2135426 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641627716 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001754687 |
|---|
| Protein GI | 170748427 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.192597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAGTC CCGTCGCCGT CACCGAGGTC CAGCCGCAAA CCCGGGCGCG GCCGGCCGGC
CCGCAGGCCG CGCTCAGCCC CGGCGAGATC CGCGCCATCG TCTACGGGCT GATGACCGCG
ATGCTGCTCG CGGCCCTCGA CCAGACCATC GTGGCGACCG CCATGCCGAC CATCGGCCTC
GACCTCGGCG ACGCCGCGAA CCTGCCCTGG ATCGTCACCG CCTACCTGCT GGCCTCCACG
GCGGTGACCC CGCTCTACGG CAAGCTCAGC GACATCCACG GCCGGCGGAT CATGCTGCTG
ATCGCCATCG CGACCTTCGT GGTCGGCTCG CTCGCCTGCG CGCTCGCGCC CACGATGGTG
GCGCTGGCGC TCGCCCGGGG CCTCCAGGGC GTCGGCGGCG GCGGGCTGAT CGCCCTGGCG
CAGACCATCC TGGCCGACAT CATGTCGCCC AAGGAGCGGG CGCGCTACCA GGTGGTGATC
GCGGGCGTGT TCGTCACGGC CTCGGTGGCG GGGCCGCTGC TCGGCGGCTT CTTCGCCCAG
CACCTGCACT GGTCGCTGAT CTTCTGGATC AACCTGCCGA TCGGCTGCCT CGCCTTCGCG
CTCACCAACG CCAACCTGAA GCGCCTGCCG CGCCACGAGC GCCGCCACCG GCTGGACTAT
CCCGGCGCCG CCCTGATGGT GGCGGGCTCC GTCACCCTCC TGCTGGCCCT GAGCTGGGGC
GGGGTGCGCT ATCCCTGGGA CTCGGCGCCG GTCCTCGCCC TCCTCGCCGG GGCGGCCGTG
CTGGGGGGCG GCTTCGCGGC GCGGCTCGCC ACGGCGCCGG AGCCGCTGAT CCCCACGGAG
GTGCTGAGGG ACCGGGTGGT CTACAGCGCG ACGCTGGCGG CCTGCTTCGC CATGGGCACC
TTCATCGGGC TCACCATCTA CGTGCCGATC TTCCTCGAAG GGGTGATCGG GCTCTCGGCG
AGCGAGTCCG GCGTGGCCCT GGTGCCGCTG ATGATCGGCA CCGTCACGGG CGCGACCCTG
TCGGGCCGGT CGATGCTGCA TTTCCGGCAC TACAAGCGGG TACCACTGGC GATGATGTGC
GTCAGTCTCG CCTGCTGCGC CACCATCGCC TGGCAGGGCC GGGCGCTGCC CTTCTGGCTC
ATGGAGGTGC TGTTCGCGCT GCTCTCCATG GGAATCGGGA CGATCCTCCC GCTCTCGACC
ATCTCGATCC AGAACGCCGT GGAGACGCAC CAGCTCGGCA TCGCCACCGC CGCGATGAAC
TTCTTCCGCT CCCTCGGCGG GGCGCTGATC GTGGCGGCCT TCGGGACGAT CGTGCTCGGC
GGCGCCGCGG GCGGGGCAGG GGGAGGGGCG CACGACGTGG AGAGCCTGAT CCGCGGCGCG
GACCCGGCCC AGCTCGCCCT GACTTTCCGC TACGTCTTCC TGGCCGCCTG CCTCGGCCTG
CTCGGCGCCT TCACGTTCCT GGCGCTGATG GAGGAGCGGC CCCTGCGCGA GCGCACGTCG
CCGAAGATGG CCGCCGAGAC GCCGGAGGCC TCCACCTGA
|
|---|
| Protein sequence | MASPVAVTEV QPQTRARPAG PQAALSPGEI RAIVYGLMTA MLLAALDQTI VATAMPTIGL
DLGDAANLPW IVTAYLLAST AVTPLYGKLS DIHGRRIMLL IAIATFVVGS LACALAPTMV
ALALARGLQG VGGGGLIALA QTILADIMSP KERARYQVVI AGVFVTASVA GPLLGGFFAQ
HLHWSLIFWI NLPIGCLAFA LTNANLKRLP RHERRHRLDY PGAALMVAGS VTLLLALSWG
GVRYPWDSAP VLALLAGAAV LGGGFAARLA TAPEPLIPTE VLRDRVVYSA TLAACFAMGT
FIGLTIYVPI FLEGVIGLSA SESGVALVPL MIGTVTGATL SGRSMLHFRH YKRVPLAMMC
VSLACCATIA WQGRALPFWL MEVLFALLSM GIGTILPLST ISIQNAVETH QLGIATAAMN
FFRSLGGALI VAAFGTIVLG GAAGGAGGGA HDVESLIRGA DPAQLALTFR YVFLAACLGL
LGAFTFLALM EERPLRERTS PKMAAETPEA ST
|
|---|
| |