Gene Mrad2831_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1854 
Symbol 
ID6137883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1983904 
End bp1985130 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content75% 
IMG OID641627561 
Productgeranylgeranyl reductase 
Protein accessionYP_001754532 
Protein GI170748272 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0189229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGGT TGGACGACGG CGGCCCCGGC CGCGACAGCT ACGACGTCGT GGTGGTCGGC 
GGCGGGCCGG CCGGCGCCAC GGCGGCGACC GACCTCGCCC GGGCCGGCCA CGCGGTGCTG
CTCCTCGACA AGCCCGGGCG GATCAAGCCC TGCGGCGGCG CGATCCCGCC GCGGCTGATC
CGCGACTTCG CGATCCCCGA CGCGCTCCTC GTCGCCAAGA TCCGCTCGGC CCGGATGGTG
GCGCCGAGCG GCAAGACCGT CGACATGCCG GTGGGCGAGG GCTTCGTCGG CATGGTCGAC
CGCGAGCATT TCGACCCGTG GCTGCGCGCC CGGGCCGCGG AGGCCGGCGC CGACCTGCGC
GCGGCCGCCT TCGAGCGGAT CACCCGGCCC GACGACGGGC CGCCGCTGGT CCACTTCACC
ACCGGCGCGG GGACCGGCCT CGCCCGCCAC GCCGTCCGGG CGCGCCTCGT CGTCGGCGCC
GACGGCGCCT GCTCGCCGGT CGGCCGCGCG GAGGTGCCGG GCCACGCCAG GATGCGGCAG
GTCTTCGCCT ATCACGAGAT CCTCCGGGTG CCGGAGGCCG GCGCCCCCGG GGCCGGGTCG
GTCGAGGCGA CCCGCTGCGA CGTCTACTAC CAGGGCCGCC ACTCGCCGGA TTTCTACAGC
TGGATCTTCC CCCACGGGGA CACGCTGAGC ATCGGCACCG GCAGCGCCCG GAAGGGCTTC
TCCCTGCGCT CCTCGATCCG CGCTCTGCGG GTGGCGACCG GCCTCGACGG GGCCGAGACC
GTCCGGCGCG AGGGCGCCCC CCTCCCCCTC AAGCCGCTGA AGCGCTGGGA CAACGGCCGC
GACGTGCTGC TGGCGGGCGA TGCCGCCGGC GTCGTCGCCC CGGCCTCCGG GGAGGGCATC
TACTACGCGA TGCTGGGCGG GCGCCTCTCC GCCGAGGCCG CCGCCGCCTT CCTCGAGACC
GGCGATGCCC GGGCGCTCGG GCGCGCGCGA AGACGGTTCA TGAAGCTGCA CGGGCGCGTG
TTCTGGATCC TCGGGATGAT GCAGTGGGTC TGGTACCGCA GCGACGGTCT GCGCGAGCGC
TTCGTCTCGA TCTGCCGGGA CAAGGACGTC CAGCAGCTCA CCTGGGACAG CTACATGAAC
AAGGAGCTGG TCCGCGCGAA GCCCGCCGCC CACGCGCGGA TCTTCTTCAA GGACCTCGCC
CACCTGTTCC GCTGGGTCTC GCCGTGA
 
Protein sequence
MARLDDGGPG RDSYDVVVVG GGPAGATAAT DLARAGHAVL LLDKPGRIKP CGGAIPPRLI 
RDFAIPDALL VAKIRSARMV APSGKTVDMP VGEGFVGMVD REHFDPWLRA RAAEAGADLR
AAAFERITRP DDGPPLVHFT TGAGTGLARH AVRARLVVGA DGACSPVGRA EVPGHARMRQ
VFAYHEILRV PEAGAPGAGS VEATRCDVYY QGRHSPDFYS WIFPHGDTLS IGTGSARKGF
SLRSSIRALR VATGLDGAET VRREGAPLPL KPLKRWDNGR DVLLAGDAAG VVAPASGEGI
YYAMLGGRLS AEAAAAFLET GDARALGRAR RRFMKLHGRV FWILGMMQWV WYRSDGLRER
FVSICRDKDV QQLTWDSYMN KELVRAKPAA HARIFFKDLA HLFRWVSP