| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1590 |
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| Symbol | |
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| ID | 6137618 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | + |
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| Start bp | 1678142 |
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| End bp | 1681072 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641627296 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001754268 |
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| Protein GI | 170748008 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0194407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAGC TCGCACGGCC GGAAGTCAAG ACACCCTTGC GCATCCTCGC CCTCCTCCTG
ACCCTGGTCG GCGGTCTCGT CGGTGCCCTC GCGCTCACGC TCGCCGCGAG CGCGCCCGCC
CGGGCCGTGG AGGCGGTCCG CGTCACCCTC GACGCGCCGG TGATCGACCT GACGACCGCG
ATCGAGCGCT ACCGCTCCGA CGGCGACCTG ATCCAGATCT CCACGGCGCC CGGCAAGGAC
GGCATCGTCC GGCGCATCGT CGTCAAGGCG CGCGACGCCG GCGCCCGGCC CGACTGGATC
GTGTTCGCGC TCACCAACGA CACCGACGAG CAGATCGACC GCATCCTGGT CGCCCCGCAT
TTCCGGCTGG TCGATTCCGG GGTGATCTGG CCCGATCTCG GCGGCTCGCG CATCGCCGCC
ATCACGGCGA GCCAGGGCAT CCGGCCCGAG CGGGACGAGA ACCCGGAGGC CGACCAGTTC
ACCATCACGC TGGATCCCGG CGCCACCGTC ACCTACGTGG CCGAGCTGCG CGGCTCCAAC
GTCCCCCAGC TCCGCCTCTG GGACCAGGAC GCCTACCGGC GCAAGACCGC CGGCCTGACC
CTCTACAAGG GCATCATCAT CGGGATCAGC GGCCTGCTCG CCCTGTTCCT GACCATCGTG
TTCGTGGTCA AGGGCGCGAT CATCTTCCCG GCCGCCGCCG CGCTCGCGTG GTCGGTGCTG
GCCTATGCCT GCATCGATTT CGGGTTCCTG CAGCGGGTCT TCCCGGTCAC CGAGCTCGCC
GAGCGGGTCT ACCGGGCCTC CGCGGAGGCG GTGCTCGGGG CGACGCTGCT GGTCTTCCTG
TTCGCCTATC TCAACCTCGC CCGCTGGCAC GTGCGCTACA GCCACGTGGC GTTCTTCTGG
CTCGCCTTCC TGGCGGGCCT CGTCGGGCTC GCGGTGTTCG ACCCGCCGGT GGCGGCGGGC
GTGGCGCGGA TCTCGATCGC CGCGGTGGCC GGCATCGGCC TGCTGCTGAT CGTCTACCTC
GCCGCCCATA ACGGCTACGA CCGCGCCATC CTGCTGGTGC CGACCTGGCT GCTTCTGGTG
GTCTGGGTCA CGGCGGCGGG CTTCGCGGTC ACCGGCCAGA TCGGCAGCGA CCTCGTGCAG
CCCGCCCTGA TCGGCGGCCT CGTGCTGATC GTGATGCTGA TCGGCTTCAC GGTGCTCCAG
CACGCCTTCG CGGGGGGCGG CCTCAGCCAC GCCCTCGTGT CCGACACGGA GCGGCGCGCG
CTGGCGCTGA CCGGCGCCGG CGACGTGGTG TTCGACTGGG ACGTGCCCGC CGACCGGGTC
TTCGTCGGCC CGGAGATCGA GGGCCAGCTC GGCCTCGCCC GCGGCACCCT CGAGGGGCCG
GCGACCAACT GGCTCGGCGC GCTCCACCCC TTCGACGTGG AGCGCTACTC GGCGGCCCTC
GACACGGTGA TCGAGGAGCG GCGCGGGCGC ATCGTCCACG ATTTCCGCCT GCGCTCGGAG
GCCGGCACGT TCTTCTGGTA CCGGCTGAAG GCGCGGCCGG TGATCGGCGC CGACGGCGAG
GTGATCCGGG TGGTCGGCAC CATCGCGGAC GTCACCGAGA TCAAGACCGC CGAGGAGCGC
CTGCTCCACG ACGCCGTGCA CGACAGCCTG ACCGGCCTGC CGAACCGCGA GCTGTTCGGC
GACCGCCTCG ACGCGGCACT CGCCTTCGCC GGCCAGGACC AGCGCCTCAA GCCCACCGTG
ATCGTCCTCG ACGTCGACCG GTTCAAGGGC ATCAACGACG CGATCGGCCT GTCGGCGGGC
GACTCGATCC TGCTGACCCT GTCGCGGCGC CTCGGCCGCC TGCTGCGGCC GCAGGACACG
CTGGCCCGGG TCGCCGGCGA CGAGTTCGCG GTGATCCTCC TCTCCGAGCG CGACCCCGAC
CGGATCCTGG CCTTCGCCGA GATGATCCGC CGGGCGATCG CCACGCCGAT CACCTACGCG
GACCGGGAGA TCTTCCTGAC CGTCTCGATC GGGCTCGCGC TCTACGAGGC GGGCGCCAAC
CTGAAGCGCG ACGAGGTGTT CAAGAGCGCC GAGATCGCCA TGATCCAGGC CAAGCGCAAC
GGCGGCGACC GGATCGAGGT GTTCCGCGCC CACATGCGCA CCGACCGCTC GGACCGGCTG
ATGCTGGAGA GCGACCTGCG CAAGGCGATC GAGCGCAACG AGATGCGGGT GCTGTTCCTG
CCGGTGGTGC GCCTCGAGGA CCGCACCGTG GCGGGGTTCG AGACCGTGCT GCGCTGGGAC
CATCCGAAGC TCGGGCGCAT CCCCGCCTCG ACCTTCCTGC CGCTCGCCGA GGAGAGCGGC
TTCGTGGTCA ATCTCGGCAT CTTCGCCCTG GAGCGCACCG CCCTGGAACT CGCGGCGTGG
CAGCGCTCCC TGGAGGTCGA GCCGCCGATC TTCGCGGCCT GCAACCTGTC CTCGCGCCAG
CTCCTGCGCC ACGACCTCCT GCACGACGTG AAGACCGTGC TGGCCCGCTC GGGGGCCCTG
CCCGGCTCGC TCAAGCTGGA ATTCAGCGAG AGCCTCGTGA TGGAGAACCC GGAATACGCC
GCCCAGATGC TGGCGCGGAT CCACGACCTC GGGGCGGGCC TGTGCCTGTC GGATTTCGGG
ACCGGCTACT CGGCCCTCTC CTATCTCCAG CGCTTCCCGT TCGACACGAT CAAGGTCGAC
GCGACCTTCG TGCGCCAGAT CGGCACCGGG CAGACCGCGA TCCTGCGCTC GATCGTGCGG
ATGGCGAGCG AGCTGAACCT CGCCATCGTG GCGGAGGGCT GCGAGTCCGA GGCCGACGCC
CAGGCCCTCG CCGGGCTCGG CTGCGAGTAC GCCCTGGGCC CGGCCTTCGG CGAGCCGATG
ACCATGCTGC AGGCCCGCCA GATCGTCGGC GCCGCCCCGG AAGCGGCCTG A
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| Protein sequence | MPKLARPEVK TPLRILALLL TLVGGLVGAL ALTLAASAPA RAVEAVRVTL DAPVIDLTTA
IERYRSDGDL IQISTAPGKD GIVRRIVVKA RDAGARPDWI VFALTNDTDE QIDRILVAPH
FRLVDSGVIW PDLGGSRIAA ITASQGIRPE RDENPEADQF TITLDPGATV TYVAELRGSN
VPQLRLWDQD AYRRKTAGLT LYKGIIIGIS GLLALFLTIV FVVKGAIIFP AAAALAWSVL
AYACIDFGFL QRVFPVTELA ERVYRASAEA VLGATLLVFL FAYLNLARWH VRYSHVAFFW
LAFLAGLVGL AVFDPPVAAG VARISIAAVA GIGLLLIVYL AAHNGYDRAI LLVPTWLLLV
VWVTAAGFAV TGQIGSDLVQ PALIGGLVLI VMLIGFTVLQ HAFAGGGLSH ALVSDTERRA
LALTGAGDVV FDWDVPADRV FVGPEIEGQL GLARGTLEGP ATNWLGALHP FDVERYSAAL
DTVIEERRGR IVHDFRLRSE AGTFFWYRLK ARPVIGADGE VIRVVGTIAD VTEIKTAEER
LLHDAVHDSL TGLPNRELFG DRLDAALAFA GQDQRLKPTV IVLDVDRFKG INDAIGLSAG
DSILLTLSRR LGRLLRPQDT LARVAGDEFA VILLSERDPD RILAFAEMIR RAIATPITYA
DREIFLTVSI GLALYEAGAN LKRDEVFKSA EIAMIQAKRN GGDRIEVFRA HMRTDRSDRL
MLESDLRKAI ERNEMRVLFL PVVRLEDRTV AGFETVLRWD HPKLGRIPAS TFLPLAEESG
FVVNLGIFAL ERTALELAAW QRSLEVEPPI FAACNLSSRQ LLRHDLLHDV KTVLARSGAL
PGSLKLEFSE SLVMENPEYA AQMLARIHDL GAGLCLSDFG TGYSALSYLQ RFPFDTIKVD
ATFVRQIGTG QTAILRSIVR MASELNLAIV AEGCESEADA QALAGLGCEY ALGPAFGEPM
TMLQARQIVG AAPEAA
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