| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1351 |
|---|
| Symbol | |
|---|
| ID | 6137370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 1414674 |
|---|
| End bp | 1415450 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641627051 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001754032 |
|---|
| Protein GI | 170747772 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0697813 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCG AGATGATCAG GGACCGGGTC TTCGTCGTCA CGGGCGCGGG CTCGGGCCTC
GGGGAGGCGG CGGCGCGGGG CCTCGCGGCG GCGGGGGCCC GGGTGGTCGT GGCCGACATC
GCCCGGGAGG CCGGCGCCCG GGTGGCGGCG GATCTCGGGG CGCGGGCCCG CTTCGTCGAG
ACGGACGTCA CCCGCGAGGC GGACGGCGCG GCGGCGGTGC GGACGGCGCT GGACGCGTTC
GGGCACCTCC ACGGGCTCGT GAACTGCGCC GGCATCGCGC CGGGGGAGAA GGTGGTCGGC
CGCGACGCGC CGCACCGGCT CGAGACCTTC GCGCGGGCGG TCTCGGTCAA CCTCGTCGGC
ACGTTCAACA TGATCCGGCT GGCCGCCGAC GCCATCGCCC GGGAGGCGCC GGACGGGGCG
GGCGCCCGGG GCGTGATCGT GAACACCGCC TCGATCGCGG CCTTCGACGG CCAGATCGGG
CAGGCCGCCT ACGCGGCCTC GAAGGGCGGG GTGGTGTCCA TGACCCTGCC GATCGCCCGG
GAACTCGCCC GGCACGGCAT CCGGGTGGTC ACCATCGCGC CGGGCATCTT CGAGACGCCG
ATGATGGCGG GCCTGCCCCA GGACGTGCAG GACACGCTCG GCCAGAGCGT GCCGTTCCCG
CCGCGCCTCG GCCGCCCGTC GGAATACGCC GACCTCGTCC GCCACATCTG CGAGAACCCG
ATGCTGAACG GCGAGACCAT CCGGCTCGAC GGGGCGCTGC GGATGCCGCC GCGCTGA
|
|---|
| Protein sequence | MASEMIRDRV FVVTGAGSGL GEAAARGLAA AGARVVVADI AREAGARVAA DLGARARFVE
TDVTREADGA AAVRTALDAF GHLHGLVNCA GIAPGEKVVG RDAPHRLETF ARAVSVNLVG
TFNMIRLAAD AIAREAPDGA GARGVIVNTA SIAAFDGQIG QAAYAASKGG VVSMTLPIAR
ELARHGIRVV TIAPGIFETP MMAGLPQDVQ DTLGQSVPFP PRLGRPSEYA DLVRHICENP
MLNGETIRLD GALRMPPR
|
|---|
| |