Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_1153 |
Symbol | |
ID | 6137171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 1214878 |
End bp | 1215393 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641626863 |
Product | Hcp1 family type VI secretion system effector |
Protein accession | YP_001753845 |
Protein GI | 170747585 |
COG category | [S] Function unknown |
COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.465729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.823154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACAC CCGCCTATAT CTCGATTGAG GGCTCGACCC AGGGCAACAT CACCCAGGGC GCCTTCACCG AAGCCTCCGT GGGCAACATC TGGCAGGAAG GCCACGAGAA CGAGATCCTC GTCCAGGCCA TCGACCACCG CGTCACCATC CCGCGCGACC CCCAGTCCGG CCAGCCCTCG GGTCAGCGCG TCCACCTGCC GTTCAAGTTC ACCGCGCCGC TGAACAAGGC GACCCCGCTG CTCTACAACG CGCTCACCTC GGGCGAGATG CTGACCAAGG TCGAGGTCAA GTGGTTCCGC ACCAGCTCGG CCGGCAAGCA GGAGCACTTC TTCACCACCC GCCTGGTCGA CGCGACCATC ATCGACATCG ACGCCCAGCT GCCGCACTGC CAGGACGCGC GCAACGCCGA CTTCACCCAG CTGATCGCCG TGTCGCTGTC CTACCGCCGG ATCGAGTGGG AGCACACCGT CGCCAGCACG TCGGGCGCCG ACGACTGGCG CAAGCCCAAG GCCTGA
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Protein sequence | MPTPAYISIE GSTQGNITQG AFTEASVGNI WQEGHENEIL VQAIDHRVTI PRDPQSGQPS GQRVHLPFKF TAPLNKATPL LYNALTSGEM LTKVEVKWFR TSSAGKQEHF FTTRLVDATI IDIDAQLPHC QDARNADFTQ LIAVSLSYRR IEWEHTVAST SGADDWRKPK A
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