Gene Mrad2831_0881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_0881 
Symbol 
ID6136897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp924935 
End bp925606 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content77% 
IMG OID641626590 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001753574 
Protein GI170747314 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00116685 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGCTCG CCGTTCCGGG CGGGATGCCC GCGCGCGGCT GGGCGCTGGC GTCGGGATCG 
GACCGTGGGG TAGATACGCC GCGTGCCGGG GGACGGAACG ACGGCGGAGC CCGGATGGCG
CTCGAACAGG AACTGGCGAC CCTGATGACG GCGGCCCAGG GCGGCGACGC GGCCGCCTAT
CGCGCGCTGC TGAAGGCCTG TCTGCCCGTG GTCTCGGCGA TCGCGCGGGC GCAGGGCGTG
CGCGGCGAGG CGGTGGACGA CGTCGTGCAG GACGCGCTGA TGACCGTCCA CCGGGCCCGG
GCGAGCTACG ATCCCGCCCG GCCGTTCCTG CCCTGGCTGC GCGCCATCAC CCAGCGGCGC
GCCATCGACC GGCTGCGCCG CGCCGGGCGG CGCCCGCAGG AGGTCAACGA CCCGCTGGCC
TACGAGGCGG AGGTCGATCC GGGGCCGGCC CCCGGCCAGG GGCTGGAGGC GCGGGACCGG
GCCGCCGCGC TGGCCAGGGC GGTGGCGGCC CTGCCCGACG GCCAGCGGCA GGCGGTGGAG
CACCTGGGCC TGCGCGAGCT GTCGCTCGAC GAGACCGCGG CCCTCACCGG CCGCAGCAAG
GGGGCCCTCA AGGTGAACCT GCACCGGGCG CTGAAGGCGC TCCGGGCCAG CCTGACGCAG
GAGCGGGAGT GA
 
Protein sequence
MMLAVPGGMP ARGWALASGS DRGVDTPRAG GRNDGGARMA LEQELATLMT AAQGGDAAAY 
RALLKACLPV VSAIARAQGV RGEAVDDVVQ DALMTVHRAR ASYDPARPFL PWLRAITQRR
AIDRLRRAGR RPQEVNDPLA YEAEVDPGPA PGQGLEARDR AAALARAVAA LPDGQRQAVE
HLGLRELSLD ETAALTGRSK GALKVNLHRA LKALRASLTQ ERE