| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0144 |
|---|
| Symbol | |
|---|
| ID | 6136444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 146884 |
|---|
| End bp | 147663 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641625866 |
|---|
| Product | cold-shock DNA-binding domain-containing protein |
|---|
| Protein accession | YP_001752854 |
|---|
| Protein GI | 170746594 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1278] Cold shock proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.569824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.04146 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGTG GTCGTGATTT CAGAGGGCCG CAGAAGCGCG GCTTCGACGA GAGTGGCGAG
CCGAGATGGC CTGATCAGGC TCCCCCCAGC GGCGGATACG GCGGCGGCGG TTTCGGCGGT
GGCGGCGGTG GTTTCGGCGG GGGCGGTTTC GATCGCGGCC CGTCGCGTGG CGCGGCTCCG
GTCGCGTCCG GGCCGGAGCG CGATGCGACG GTCAAGTGGT TCAACAAGGA GAAGGGCTTC
GGCTTCGTCG AACTCGGCGA CGGTTCGGGC GATGCCTTCC TCCACATCCG CGCTGTCGAG
GCGGCCGGCC ACGACGATCT GATGCCGGGC ACCCGGCTGA CGGTCACGAC GGCCCAGGGC
CAGAAGGGCC CGCAGGTCAC GAGCGTCACC AGCGTTGACA CCTCCACGGC CGAGGCGCCC
GCGCCCCGGC GTGAGTTCCG CCCGCGCACC GGCGGCTACG GCGCCGGTGC CGGCGGCTAC
GGCGACCGCG ACCGCGGTGG TTACGGCGGC GGTGGCGGCG GCTACGGCGG TGGTGGCGGC
GGCGGTGGCC GTTTCGCCAG CGGCCCGTCG GTGGAGATGA GCGGCACCGT GAAGTGGTAC
GATCCCGCGA AGGGCTTCGG CTTCGTCTCG GTCAACGACG GCGGCAAGGA CGTGTTCGTG
CACCGCTCGG CGCTGTCCCG CGCCGGTCTC GACTCGCTCG CCGAAGGTCA GCAGGTCACG
CTCGGCGTGG TCGAGGGCCA GAAGGGCCGC GAGGCCCAGA GCATCAACGT CGAGGATTGA
|
|---|
| Protein sequence | MGRGRDFRGP QKRGFDESGE PRWPDQAPPS GGYGGGGFGG GGGGFGGGGF DRGPSRGAAP
VASGPERDAT VKWFNKEKGF GFVELGDGSG DAFLHIRAVE AAGHDDLMPG TRLTVTTAQG
QKGPQVTSVT SVDTSTAEAP APRREFRPRT GGYGAGAGGY GDRDRGGYGG GGGGYGGGGG
GGGRFASGPS VEMSGTVKWY DPAKGFGFVS VNDGGKDVFV HRSALSRAGL DSLAEGQQVT
LGVVEGQKGR EAQSINVED
|
|---|
| |