Gene Mpop_5417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5417 
Symbol 
ID6309808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5795674 
End bp5796570 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content68% 
IMG OID642654099 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_001928044 
Protein GI188584599 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.36754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCCGA AAATTACGGA CCGCCGCTCC GCCTCGCTGC TCGTCTCCGC GCCCGCTCAA 
GCGCTTGCCG GTGCGTCGGC AGACCTCGAT CCGCTCGCCT TATCCACCGG CTCCGACGAA
GCGACTCGGC GCGCGCCGGG GCACGAGGGG CGCGATCCGT TCTCGCGCAA GCTCTCGACC
TGCGTGGATC TCACCGCCGG CGATCTTCGC GAATTGGAGC GGCTGGCCGC CACCGGCCGG
CGCTTCCCGG CTCAGACGCC GCTCCTGCAC CAGTCCGACG TTCCGGAGAA CGCTATCCTC
GTGCTCGACG GCTTCGCCTG CCGCTACAAG TACCTTACGA ACGGCCGGCG CCAGATCACT
GCCTACCTTG TTCCCGGCGA CCTGTTCGAA CTCGATCTGG ATTACCGCCT GCCCCTCGAT
TGCGCCCTCG GAACCCTGAC CGCCTGCCGG CTCGCGGTGC TTCCGCGACC CGATTACGAG
GATCTGCTCC GCCGCCGCCC GCGGATCGCC CGCGCTCTCC AGATGATGCG GCTGACCGAA
GCCGCAATCT TGCGCGAGTG GATCACCAAT CTCGGCTCCC GGTCCGGCCC CGAGCGTCTC
GCGCACTTCC TCTGCGAGAT GCTGCTGCGG CTGCGGACGA CCGGGCTCGC ATCCGACAAT
CAGTACAGCT TCCCCATCAC CCAGGCCGAT CTCGCCGATA CGCTCGGCAT GTCGTGCGTG
CACATCAACC GCGTCCTGCA GAAGCTGCGC CGTGACGGAC TGATCGAGCT GTCCGGCCGC
CGGCTCACGA TCCTGAAGCC CGAGGGGCTC AAGACGCTGG CCGAATACGA CGCGTCCTAT
CTGGAACCCG CCGCGATCCC GCTGCGTCCC TGCGTCAGCG ATCGGCCGGC CGCCTAG
 
Protein sequence
MLPKITDRRS ASLLVSAPAQ ALAGASADLD PLALSTGSDE ATRRAPGHEG RDPFSRKLST 
CVDLTAGDLR ELERLAATGR RFPAQTPLLH QSDVPENAIL VLDGFACRYK YLTNGRRQIT
AYLVPGDLFE LDLDYRLPLD CALGTLTACR LAVLPRPDYE DLLRRRPRIA RALQMMRLTE
AAILREWITN LGSRSGPERL AHFLCEMLLR LRTTGLASDN QYSFPITQAD LADTLGMSCV
HINRVLQKLR RDGLIELSGR RLTILKPEGL KTLAEYDASY LEPAAIPLRP CVSDRPAA