Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5379 |
Symbol | |
ID | 6313055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5754916 |
End bp | 5755464 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642654060 |
Product | HNH endonuclease |
Protein accession | YP_001928006 |
Protein GI | 188584561 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.785631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.574785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGATC TTCAGACCCT GGTGCTCAAC GCGGATTACC GGCCGCTTTC CTACAATCCG CTGTCGTTGT GGTCCTGGAA GGACGCGTTC ACGGCCCTGT TTCTCGATCG CGTCACCCTG GTCGCCAATT ACGATATCGA GGCGCACAGC CCCAGCCGGT CCCTCAAGGT GCCGAGCGTG GTCGCCCTCA AGAGCTATGT GGCGCTGGCG CGCAGCCCGG CCTTCACCCG CTACAACATC TACCTGCGCG ACACCTTCAC CTGCCAGTAT TGCGGCCTGC GTCTCCCCTC CGGCGGCCTG ACCTTCGACC ACGTCGTGCC CCGCTCCCGC GGTGGTCTCT CCACCTGGGA GAACGTCGTG GCGGCCTGCT CACCCTGCAA CCTGCGCAAG GCCAACCGCA CCCCCGACGA GGCGGAGATG CCCCTCCTCA ACGAGCCGCA CCGGCCGACG CGCCACGAAC TGCACCGCCG CCAGCCGGAA TTCGACCACC GCCAGTATCA CCACACCTGG CTCGACTATC TCTACTGGGA CAGCGAACTC GACAGCTGA
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Protein sequence | MIDLQTLVLN ADYRPLSYNP LSLWSWKDAF TALFLDRVTL VANYDIEAHS PSRSLKVPSV VALKSYVALA RSPAFTRYNI YLRDTFTCQY CGLRLPSGGL TFDHVVPRSR GGLSTWENVV AACSPCNLRK ANRTPDEAEM PLLNEPHRPT RHELHRRQPE FDHRQYHHTW LDYLYWDSEL DS
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