| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_5296 |
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| Symbol | |
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| ID | 6313454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 5662144 |
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| End bp | 5663220 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642653978 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001927924 |
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| Protein GI | 188584479 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.487965 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.852647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGAGG ACGACGCGAC CGCCGACGAC CGGCACCGGG ACCGCCCAAT CTCAAACGAG
GCCGCCTCCG ACGAGCCGCG CCCGAAGCGG CGGGCGGACA CGAAGCCCGC GGCCGGACGG
CGGCGGCACT GGAGCCGCCT TCTGCGGCTC GCGGTGACCG GCCTCGTCCT CGCCTGCGCG
ACGGTGGCGG CCTACGTGGT CTGGCAATTC TACGTGACCG CCCCCTGGAC CCGCGACGGG
CGGGTGCGGG TGCAGGTCGT CAACCTCGCC CCGCAGGTGG CCGGCACCAT CGTCGAGCTG
CGGGTCGCCG ACAACCAGGA GGTGAAGCGG GGCGACGTCC TCTACGTCAT CGACCCGTTC
GACTATCAGG AGGCGGTCGT CTCGGCCGAG GCCGAGATCA AGAACCGCGA GGCCGATCTC
TCGGTGAAGC AGGCGCAGGC CGCGAGGCGG GCGGCGCTCT CCACCGTCTC GACCTCGGTC
GAGGAAAAGC AGCAATATGC CGGCACCGCC AAGATCGCCG AGGCGGCGCT GGAGACCGCC
CGGTCGCAGC TCTCGCAGGC GAGGAAGAAT CTGGAGCGCA CCCAGGTCCG CTCGACCGTC
AACGGCCGGG TGACCAACCT GCTCCTGCGG GTCGGCGATT ACGCCCAGAC CGGCACCGCC
AACATGCGGG TGATCGACAC CGATTCCTTC TGGGTCGACG GCTATTTCGA AGAGACCAAG
ATGGCGCATA TCCGCGTCGG CGCACCCGCC GAGATGGCGC TGATGGGCTA CGGCACAGCC
CTGCGGGGCA CGGTGGAGAG CCTGACGCTC GGTATCTCCA CGGCCAACGC CGCGACGAGC
ACGCAAGGAC TGCCGAACGT CGATCCAGTC TATACCTGGG TGCGGCTCGC CCAGCGGGTG
CCGGTGCGGA TCCGCATCGA CCACGTGCCG CCGGAGGTGA CGCTCGTGGC GGGCATGACC
GCGACCGTCG TCGTCGGCGA CGGCCGCGAG GGGCAGCCGC ACTGGGTGAA GTCGGTGCGC
GACTGGGTCC TCGGAAATCC CGAACCGAGC CAGCCCGGCT CGAACGGGAA GAACTGA
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| Protein sequence | MKEDDATADD RHRDRPISNE AASDEPRPKR RADTKPAAGR RRHWSRLLRL AVTGLVLACA
TVAAYVVWQF YVTAPWTRDG RVRVQVVNLA PQVAGTIVEL RVADNQEVKR GDVLYVIDPF
DYQEAVVSAE AEIKNREADL SVKQAQAARR AALSTVSTSV EEKQQYAGTA KIAEAALETA
RSQLSQARKN LERTQVRSTV NGRVTNLLLR VGDYAQTGTA NMRVIDTDSF WVDGYFEETK
MAHIRVGAPA EMALMGYGTA LRGTVESLTL GISTANAATS TQGLPNVDPV YTWVRLAQRV
PVRIRIDHVP PEVTLVAGMT ATVVVGDGRE GQPHWVKSVR DWVLGNPEPS QPGSNGKN
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