Gene Mpop_5126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_5126 
Symbol 
ID6312538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5490002 
End bp5491369 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content69% 
IMG OID642653808 
ProductChloride channel core 
Protein accessionYP_001927757 
Protein GI188584312 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.967493 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGG CAGATCGACC CGCTACCCCC CTGCAGCAGG CAAGCTTCGT CGCCGTGGCC 
CTGTTCGTCG GCGCCCTCAC GGGCGTGTTC GGCGGCCTCT TCCACCTTGC CATCGACACG
ATCATCGAAT GGCCGACATG GCTCGCCGGC CGGGTCGAGG GCTGGCGGCA GGTCGCGGCG
AGCGCCGCCG TCACGACGGC GGCCGCGGTC TTTGCCGTGT TCATCACCCG GCGCTTCGCC
CCCGAGGCGA GCGGGAGCGG GGTGCCGGAG ATCGAGGGGG CCATCGCCGG CATCCGGCAC
GTGCGTTGGG AGCGCGTGCT GCCGGTGAAG TTCATCGCCG GGATCGCCGC CATCGGCTCG
GGGCTCGTTC TCGGCCGGGA GGGACCAACC ATTCACATGG GCGGTTCGGC AGCGCTCGCC
GCCTGCCAGA TGTTCCGGAT GCGGGACGTC GATCGAAAGG CCTTGCTGGC GGCCGGCGCG
GGGGCGGGTC TCGCCTGCGC CTTCAATGCC CCGTTGTCGG CCGTGCTCTT CGTCATCGAG
GAAACGCGCA AGCAGTTCCC GTACACGTTC CGGAACTACA TGGGGGTGTT CGCGGCCGCG
ATCACCGGAA CGGCGGTGAC CCAGATCATT TCGGGCGAAC GACCGGATCT GCCGCTGTCC
GCCGGACAGG CGGCGCTGGC GTCGTTGCCG GCCTTCGCCA TCCTGGGCAT CATCCTGGGT
GCCGTGGGCG TGCTCTTCAA TCGATGCATC CTGGCGATGC TGGACATCGC CGCCGCTTGG
CAGAAGCGGG CACCCTATCT GTGGCCCACC CTGGTCGGGC TGCTCGTGGG CATCCTGCTG
ATCGTCGCTC CGCGCACCGT CACCGGCGGG GAACGGGTCA TTTCTCAGAT CGCCGTGCAG
ACACCGGGTG CCGGCGTCCT CCTGATGCTG GCCGGCGCCC GGCTCCTCAC CGCAGTTGTC
AGCTATTCCA TCGGGACGCC GGGCGGCATC TTTGCGCCGA TCCTGTCCCT CGCGACCTGC
ATCGGCTTGG CCTTCGGCGT GCTCGCGCAG ACGGCCTTCC CCGAAGCCTT GGCCGGCATG
GGGGTGACGC CGGTCTCCTT CGGGATCGTG GCGATGGCCG CGCTGTTCAG CGCAACCGTC
CAAGCTCCGG CCGTGGGCGT GGTACTGCTG CTTGAACTCA CCAGCGCCTA TGCGCTCGTC
CTGCCCATGT TGACGGCCTG CCTGACGGCG AGCCTCGTGG CCCAATGGCT GGGTGGCCGT
CCGATCTACG GACAGATGCT GGATCGCACC CTGGCCCGGG CCGGCAGGGG TCCAGCCAAG
GGCTCGGATG TCGGTCTGGC TGCCGATCCG GCGCGTGCGA CACACTGA
 
Protein sequence
MEPADRPATP LQQASFVAVA LFVGALTGVF GGLFHLAIDT IIEWPTWLAG RVEGWRQVAA 
SAAVTTAAAV FAVFITRRFA PEASGSGVPE IEGAIAGIRH VRWERVLPVK FIAGIAAIGS
GLVLGREGPT IHMGGSAALA ACQMFRMRDV DRKALLAAGA GAGLACAFNA PLSAVLFVIE
ETRKQFPYTF RNYMGVFAAA ITGTAVTQII SGERPDLPLS AGQAALASLP AFAILGIILG
AVGVLFNRCI LAMLDIAAAW QKRAPYLWPT LVGLLVGILL IVAPRTVTGG ERVISQIAVQ
TPGAGVLLML AGARLLTAVV SYSIGTPGGI FAPILSLATC IGLAFGVLAQ TAFPEALAGM
GVTPVSFGIV AMAALFSATV QAPAVGVVLL LELTSAYALV LPMLTACLTA SLVAQWLGGR
PIYGQMLDRT LARAGRGPAK GSDVGLAADP ARATH