Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_5094 |
Symbol | |
ID | 6312797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5455771 |
End bp | 5458983 |
Gene Length | 3213 bp |
Protein Length | 1070 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642653776 |
Product | DNA polymerase III, alpha subunit |
Protein accession | YP_001927725 |
Protein GI | 188584280 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0587] DNA polymerase III, alpha subunit |
TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.695828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CGGAGCTTCA GGTCACGACG CACTTCTCCT TCCTGCGCGG CGCCTCGAGC CCGGAGGAGC TGTTCTCCGC CGCCAGCCTG CTCGGCATCC CGGCCCTCGG GATCACCGAT CACGGCTCGC TTGCCGGGAT GGTGCGGGCG CATCAGGCGG CCAAGGTGAC GGGCGTGCGC CTCGTCGTCG GCTGCCGGCT CGACCTCGAC GATTTCCTGC CCCTGCTCGT CTATCCGACC GACCGGGCCG CCTATGGCCG CCTCTGCCGC CTGCTCAGCC TCGGCAAAGC CCGCGGCGGC AAGGGCCGCT GCCGTCTGAC ATGGGCCGAC CTCGAAGCGT GGCAGGAGGG GCTTTTCGCC GTCCTTCTGC CCGAGGGGCG GGAGGCCGCG CTCCCAAGCG ACCTTGCAAG CCACCTCGTC CAACTCAGAA AAACATTCGG CGTCCGCGCC TCCTGCGCGC TGACCCGCCG CTTCCGCCCC GACGATGCGG ATCGGCTCGA CGCTCTGGCC GCCGCCGCCC GCGCCGCACG GGTGGCGACC GTCGCCACCG GCGACATCCT CTACCACGTC GCAGGGCGCC GCCGGCTGCA GGACGTGGTG ACCTGCATCC GGCTCGGGCT CACCATCGAC CGGGCAGGCT TTGCCAAGGA GCGCCACGCC GACCGCTTCC TCAAACCCCC GGACGAGACC GCGCGCCTGT TCGCCCGCTT CCCCGAGGCG CTGGCGCGGG CGGGCGAGAT CGCCGCCGCC TGCACCTTCT CGCTGGACGA CCTCGCCTAC ACCTACCCGA CGGAGGCCCG CGAGGACGGG CTCTCGCCGC AGGAGCGCCT GGAGGCTCTC ACCTGGGCCG GGGCGGAGCG GCGCTATCCG GCCGGCGTAC CGGAGGCGGT GACGCGCCAG TTGCGCCATG AGCTCGACCT GATCGGGCGG CTGGCCTACG CCCCCTACTT CCTCACGGTC GAATCGATCG TGGCCTTTGC CGATCGCAAA AAGATCCTGT GCCAGGGGCG CGGCTCGGCG GCCAATTCCG CGGTCTGCTT CTGTTTGCGG ATCACCTCGA TCGATCCGAT CCGGCAGAAC CTGCTGTTCG AGCGCTTCGT CTCGGAGGCG CGCCGCGAGC CGCCCGACAT CGACGTCGAT TTCGAGCACG AGCGCCGCGA GGAGGTGATC CAGTGGATCT TCGAGACCTA CGGCCGCCAC CGCTCCGCGC TCACCGCCAT CGTCAGCCGC TTCCGCTCGC GGGGCGCCTT GCGTGAGGTC GGCAAGGTGA TGGGCCTGCC CGAGGACGTG ACCGGCGCCC TCAACCGCCT GACCTGGAGC TGGAGCAGCG AGGGCGTCGG CGAGCGCGAA TTGCGCGAAC TCAACCTCAA CCCCGACGAC CGGCGCCTGC GCCTGACGCT CGAGATCGCC CGCGAGCTGA TCGGCACGCC GCGCCACCTG TCGCAGCATC CCGGCGGCTT CGTGCTGACG CTGGACCGGC TCGACGAGCT GGTGCCGGTC GAGCCGGCGG CGATGGCCCA CCGCCAAGTC ATCGAGTGGG ACAAGGACGA CATCGACGCC CTCAAGTTCA TGAAGGTCGA CGTGCTGGGC CTCGGCATGC TCGGCTGCCT GCGCCGCGCC TTCGATCTGT TGGCCGAGGT CAAGAACCAG CCGCGCGACC TCGCCTCGAT CCCGCAGGAG GACGGGGCCA CCTACGCGAT GATCCGGCGC GCCGACACGC TGGGCGTGTT CCAGATCGAG AGCCGCGCGC AGATGGCGAT GCTGCCGCGG ATGAAGCCCA GGACCTTCTA CGACCTCGTG ATCGAGGTGG CGATCGTGCG CCCCGGCCCG ATCCAGGGCG ACATGGTCCA TCCCTACATC CGCCGTCGGG AAAAGCGTGA GGAGGTGACC TACCCGACGC CCGAGCTGAA GGCGGTTTTG GAGAAGACGC TGGGCGTGCC GCTGTTCCAG GAGCAGGCGA TGCAGGTGGC GATGGTCGGC GCCGGCTTCT CGGCGATGGA GGCCGACGAG TTGCGCCGCT CCATGGCGAC CTTCAAGTTC ACCGGCGGCG TCCACCGCTT CCAGACGCGG CTGGTCGAGG GCATGATCGC CAACGGCTAC GCCCGGGATT TCGCCGAGCG CACCTTCAAG CAGCTCGAAG GCTTCGGCTC CTACGGCTTT CCCGAGAGCC ACGCCGCCTC CTTCGCGCTG CTCGCCTACG CCTCCTCCTG GATGAAGTGC CACCATCCGG ACGTCTTCTG CGCCGCGCTC CTCAACGCGC AGCCGATGGG CTTCTACGCC CCCGCGCAGA TCGTGCGCGA CGCCCGCGCC CACGGCGTCG TGATCCGCCC GCTCGACGTG AATTATTCGG AATGGGACTG CACCCTGGAA TCCCTCGGCG AGGGCCGAGA GCTGTTCGCG GTGCGCCTGG GGCTGCGGCT GGCCAGCGGC CTGCCCGAGC GCGACGGCCG GCATCTGGCG AAGATGCGTG GTGGGCGGCC CTTCGCCTCC CTGCCCGAAC TGGCAGACCG GGCCGGCCTC CCCGCCACGG CGCTCACCTG CCTCGTGCGG GCCGATGCCT TCCGCTCCCT CGGCCTGAAC CGGCGCGAGG CCGCCTGGGC GGCCAAGGCC CTGCGGCCCG ATCCCCTCCC CCTCTTCGCC ACCCTGTCCG AACCGGCGCA GGCGGCCGAA CCCGCCGTAT CGCTGCCGGC GATGAGCGCG GGCGGCGAGG TCGTCGCCGA TTACTGCGCC AAGGGCCTCA GCTTGCGGGC CCATCCCCTC GCCTTCCTGC GCGGAACGCT GGGCAGGCTC GGCGCGCGGC CCTGTGCGGC GCTCGACCGG GTGGCCAACG GCGCGTCGAT CGTCGTGGCC GGCATCGTGC TGATGCGCCA GCGGCCGGGC TCGGCCAAGG GCACGATGTT CATGACCCTG GAGGACGAGA CCGGGATCGC CAACCTGATC GTCCGCCCCG AACTGTTCGA CCGGCAGCGC CGGGTCGTGC TCGGCGCCCG GCTGATGGCC TGCCGCGGAC GGGTGCAGCG GGTCGGCGAG GTGGTCCACC TCGTGGCCGC GGAACTCTTC GACCGCTCCG GCCTGCTGCG GCGGATCGGC CAGGATATCG GCGAGGAACC CGACCTCGTC CTGCGCACCG GCCGCGGCGA CGAGACCGGC CAGAGCGTGC GCCCCGACCC GCGCGGGGAT GCGCTGCCGG TGCGGGCGCG GAATTTTTGC TAG
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Protein sequence | MSTPELQVTT HFSFLRGASS PEELFSAASL LGIPALGITD HGSLAGMVRA HQAAKVTGVR LVVGCRLDLD DFLPLLVYPT DRAAYGRLCR LLSLGKARGG KGRCRLTWAD LEAWQEGLFA VLLPEGREAA LPSDLASHLV QLRKTFGVRA SCALTRRFRP DDADRLDALA AAARAARVAT VATGDILYHV AGRRRLQDVV TCIRLGLTID RAGFAKERHA DRFLKPPDET ARLFARFPEA LARAGEIAAA CTFSLDDLAY TYPTEAREDG LSPQERLEAL TWAGAERRYP AGVPEAVTRQ LRHELDLIGR LAYAPYFLTV ESIVAFADRK KILCQGRGSA ANSAVCFCLR ITSIDPIRQN LLFERFVSEA RREPPDIDVD FEHERREEVI QWIFETYGRH RSALTAIVSR FRSRGALREV GKVMGLPEDV TGALNRLTWS WSSEGVGERE LRELNLNPDD RRLRLTLEIA RELIGTPRHL SQHPGGFVLT LDRLDELVPV EPAAMAHRQV IEWDKDDIDA LKFMKVDVLG LGMLGCLRRA FDLLAEVKNQ PRDLASIPQE DGATYAMIRR ADTLGVFQIE SRAQMAMLPR MKPRTFYDLV IEVAIVRPGP IQGDMVHPYI RRREKREEVT YPTPELKAVL EKTLGVPLFQ EQAMQVAMVG AGFSAMEADE LRRSMATFKF TGGVHRFQTR LVEGMIANGY ARDFAERTFK QLEGFGSYGF PESHAASFAL LAYASSWMKC HHPDVFCAAL LNAQPMGFYA PAQIVRDARA HGVVIRPLDV NYSEWDCTLE SLGEGRELFA VRLGLRLASG LPERDGRHLA KMRGGRPFAS LPELADRAGL PATALTCLVR ADAFRSLGLN RREAAWAAKA LRPDPLPLFA TLSEPAQAAE PAVSLPAMSA GGEVVADYCA KGLSLRAHPL AFLRGTLGRL GARPCAALDR VANGASIVVA GIVLMRQRPG SAKGTMFMTL EDETGIANLI VRPELFDRQR RVVLGARLMA CRGRVQRVGE VVHLVAAELF DRSGLLRRIG QDIGEEPDLV LRTGRGDETG QSVRPDPRGD ALPVRARNFC
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