| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4936 |
|---|
| Symbol | |
|---|
| ID | 6311123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5272133 |
|---|
| End bp | 5273593 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642653617 |
|---|
| Product | Na+/solute symporter |
|---|
| Protein accession | YP_001927567 |
|---|
| Protein GI | 188584122 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0902202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.121297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGG CGCTTCCGAT CATCGCGCTC GCCGTCCTGG TGGCGCTCGG TCTGGGCCTG
CGGGCGCGGT CGGGCCACGA CATGGACATG GAGCAGTGGA GCGTGGGCAA GCGCGGCTTC
GGCACGCTGC TCGTCTTCCT GCTGATGGCG GGCGAGATCT ACACCACCTT CACCTTCCTC
GGCGGCTCGG GCTGGGCCTA CGGCAAGGGC GGGCCGACCT ACTACATCCT CTGCTACCTG
ACGCTGATCT ACGTCATCTC CTACTGGATC CTGCCGCCGG CCTGGCGCTT CGCCAAGGAG
CGCAACCTGT TCTCGCAGCC CGATTATTTC GCGGCGCGCT ACGACAGCAA AAGCCTCGGC
ATCCTCGTGG CGCTCGTCGG GATCGTGGCG CTGGTCCCCT ACATGGTGCT CCAGTTGAAG
GGGCTCGGCA TCATCGTCGC CACCGCCTCC TACGGGGCGA TCTCGCCGAC CCTTGCGATC
TGGATCGGCG CGGCCGTGCT CACCGTCTAC GTCATGGTCT CGGGCGTGCG CGGCTCGGCC
TGGACCGCCG TGCTCAAGGA CTTCATGATC CTGTTCGTGG TGCTGTTTCT GGGGATCTAC
CTGCCCTATC ACTACTATGG CGGCATCGGG GCGATGTTCA CCGCGATCGA TGGGGCGAAG
CCCGGCTTCC TGGCGCTGCC GGATCGCGGC CAGAGCGCGA CATGGTTCGC CTCGACCACC
TTGCTCACGG CGCTGGGCGG CTGGATGTTT CCGCACATCT TCGCCTCGAT CTACACCGCG
AGCGACGAAC GCACCTTCCG GCGCAACGCG GTGTTCCTGC CGCTCTACCA GCTCATGCTG
CTGTTCGTGT TCTTCGCGGG CTTCGCCGCG GTGCTGCAGG TGCCGGGGCT GACGGGGCCG
GACGTCGATC TCTCGCTGTT CAAGATCGCG CTCCAGACCT TCCCGCCGTG GTTCGTCGGC
GTCATCGGCG CCACCGGCGT ACTGACCGCC CTGGTGCCGG GCTCGATGAT CCTGATCGCC
GGCTCGACGC TGATCGCGCA GAACCTTTAC CGGCCGCTGG CGCGCAACGC GACCGATGCC
ACCACCGGCC GCCTCGCCAA GGGGATCGCG CCGCTGCTGG CGCTCGCCTG CGTCGGCTTC
ACCCTCTACG GCGGCGAGAC CATCGTGCAG CTGCTGCTGA TCGGCTACGC CGTCGTCACG
CAGCTGTTTC CGGCCTTCTT CTTCAGCCTC CTGCCCAACA ACCCGCTGAC GCGGGCGGGG
GCGATGGCCG GCATCCTGGC GGGCGTCGCC GCCGTGGCGG TGACGGTGGT CGGCGGCTAC
ACCCTGGCCA AGCTGTTCCC CGGCCTGCCG GGACCGGTGC AGGATCTCAA CATCGGCGTC
GTGGCCCTGG CGCTCAACCT CGCGGTGGCC TTCGCCGTCA GCCTCGCGGG GCGGGGGGCA
CGGCGGACGG CGATGCCGTA A
|
|---|
| Protein sequence | MNAALPIIAL AVLVALGLGL RARSGHDMDM EQWSVGKRGF GTLLVFLLMA GEIYTTFTFL
GGSGWAYGKG GPTYYILCYL TLIYVISYWI LPPAWRFAKE RNLFSQPDYF AARYDSKSLG
ILVALVGIVA LVPYMVLQLK GLGIIVATAS YGAISPTLAI WIGAAVLTVY VMVSGVRGSA
WTAVLKDFMI LFVVLFLGIY LPYHYYGGIG AMFTAIDGAK PGFLALPDRG QSATWFASTT
LLTALGGWMF PHIFASIYTA SDERTFRRNA VFLPLYQLML LFVFFAGFAA VLQVPGLTGP
DVDLSLFKIA LQTFPPWFVG VIGATGVLTA LVPGSMILIA GSTLIAQNLY RPLARNATDA
TTGRLAKGIA PLLALACVGF TLYGGETIVQ LLLIGYAVVT QLFPAFFFSL LPNNPLTRAG
AMAGILAGVA AVAVTVVGGY TLAKLFPGLP GPVQDLNIGV VALALNLAVA FAVSLAGRGA
RRTAMP
|
|---|
| |