Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4879 |
Symbol | |
ID | 6310850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5211748 |
End bp | 5213157 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642653559 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001927510 |
Protein GI | 188584065 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.29662 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.101077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGC CGCGCACCCT CTACGATAAG ATCTGGGACG ACCACGTCGT CGATGTTGGG CCGGATGGCT CCGCCCTCCT CTACATCGAC CGCCACCTCG TGCACGAGGT GACGAGCCCC CAGGCGTTCG AGGGGCTTCG CGTCGCCGGC CGCAAGGTCC ATGCGCCCCA CAAGACGCTG GCGGTGGTCG ATCACAACGT CCAGACCTCG GACCGCTCCA AGGGCATCGA GGATCCGGAG AGCCGCACGC AGCTCGAGGC GCTCGCCGAG AACGTGCGCG ACTTCGGCAT CGAGTTCTAC GACGCCCTCG ACCGGCGCCA GGGCATCGTC CACATCATCG GACCGGAGCA GGGCTTCACC CTGCCGGGCC AGACGATCGT GTGCGGCGAC AGCCACACCT CGACCCACGG CGCCTTCGGC GCGCTGGCCC ACGGCATCGG CACCTCGGAG GTCGAGCACG TGCTCGCCAC CCAGACGCTG ATCCAGCGTA AGGCCAAGAA CATGCGCGTC ACCGTCGACG GCACGCTGCC GCCGGGCGTC AGTGCCAAGG ACATCGTGCT GGCCATCATC GGCGAGATCG GCACCGCCGG CGGCACCGGC CACGTCATCG AATATGCCGG CGAGGCGATC CGCGCCCTCT CGATGGAGGG CCGGATGACG ATCTGCAACA TGTCGATCGA GGGCGGGGCG CGGGCCGGCA TGGTCGCCCC CGACGAGATC ACCTACGCCT ACGTCAAGGA CCGCCCGAAG GCGCCCAAGG GCGCCGCCTT CGACGCGGCC CGCCGCTACT GGGAAAGCCT CGTCTCCGAC GAGGGCGCGC AGTTCGACCG CGAGATCCGG CTCGACGCGG CCAACCTCCC CCCGCTGGTC TCCTGGGGCA CCAGCCCCGA GGACATCGTC TCGATCCTCG GCACCGTGCC CGATCCGGCG CAGATCGCCG ACGAGAACAA GCGCCAGTCC AAGGAGAAGG CTTTGGCCTA TATGGGCCTG ACGCCGGGCA TGCGGATGAC CGACATCACC CTCGACCGGG TGTTCATCGG CTCCTGCACC AACGGCCGCA TCGAGGATCT GCGCATCGTC GCCAAGATGG TCGAGGGCCG CAAGGTCCAT GACGGCGTCT CGGCGATGGT GGTGCCGGGC TCCGGCTTGG TGAAGGCGCA GGCCGAGGCC GAGGGGATCG ATCGTATCCT CAAGGACGCG GGCTTCGACT GGCGTGAGCC CGGCTGCTCG ATGTGCCTCG GGATGAATCC GGACAAGTTG CGGCCGGGCG AGCGCTGCGC CTCGACCTCG AACCGCAACT TCGAGGGCCG ACAGGGTCCG CGCGGACGCA CGCACCTCGT CTCCCCGGCC ATGGCGGCGG CGGCGGCGGT GGCCGGCCGC TTCGTCGACA TCCGTGAGTG GCGCGGCTGA
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Protein sequence | MTAPRTLYDK IWDDHVVDVG PDGSALLYID RHLVHEVTSP QAFEGLRVAG RKVHAPHKTL AVVDHNVQTS DRSKGIEDPE SRTQLEALAE NVRDFGIEFY DALDRRQGIV HIIGPEQGFT LPGQTIVCGD SHTSTHGAFG ALAHGIGTSE VEHVLATQTL IQRKAKNMRV TVDGTLPPGV SAKDIVLAII GEIGTAGGTG HVIEYAGEAI RALSMEGRMT ICNMSIEGGA RAGMVAPDEI TYAYVKDRPK APKGAAFDAA RRYWESLVSD EGAQFDREIR LDAANLPPLV SWGTSPEDIV SILGTVPDPA QIADENKRQS KEKALAYMGL TPGMRMTDIT LDRVFIGSCT NGRIEDLRIV AKMVEGRKVH DGVSAMVVPG SGLVKAQAEA EGIDRILKDA GFDWREPGCS MCLGMNPDKL RPGERCASTS NRNFEGRQGP RGRTHLVSPA MAAAAAVAGR FVDIREWRG
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