Gene Mpop_4868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4868 
Symbol 
ID6310983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp5199250 
End bp5201355 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content72% 
IMG OID642653548 
ProductFMN-binding domain protein 
Protein accessionYP_001927499 
Protein GI188584054 
COG category[K] Transcription 
COG ID[COG3901] Regulator of nitric oxide reductase transcription 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.153246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0739563 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCTC GACGCGCCTC GAACCTCCTG CGACCGGCAC TCCTCGCGCT TCTCGCCCTG 
CTCCTGGCCG TCCCGCTCGC CGCGGCGGGC ACGCTCGACC GGGCCGGAAT GGAACGCTAC
TTCCCCGCGC CGCTGGTGGT CGGCGAGCGC GACGCGACGC TGCCGGTCTG GCCGATCCTG
AAGCAGGAGG CCGGCAGCTA CGAAGTCTTC GCCTACGCCT TCGAGTCGAT CGACCTCGCA
CCGATCCCCG GCTTCGGCGG CACGCCGCCC GATCTCCTGG TGGCGCTCGC CCCCGACGGG
ACCTTCCGCG ACGTGCGGGT CGTCTCCCAT CACGAGCCGG TCTTCCTCGA AGGTCTCGGC
TCGGAACCGC TCTTCGCCTT CGTCGAGCAA TATGTCGGGA TGTCGGCCCG CCGCCCGATC
CGGGTCGGGC GCCCTAACGC CCGCGGCTCG GGCGCCGCGC CCCAGACCAC GGTCGACGGC
ATCTCGATGG CCACCGCCTC GACCCGGGTG ATCAACGAAT CGATCCTCGC CGCCTCCCTC
GCCGTGGCCC GGGCGAAGCT CGGCTTCGGG GCCGCCAATG TCGGGTTGAA GGTCGAGGCG
CGTCCCGATC CCGGCGAAGC CCCGACGGTG GCCGAGCTGA CCGCGCGGGG CTGGCTCCGG
CGCCTCACCG TCAGCAACGA ACGGGCCGAG GCCGCCTTCC GTGACGCGGG CGTGGCGGGC
GCCGGTGACG GACCGGCCGC GGCGCCGCTG ATCGATCTGA CCTTCGCCTA TCTCAACGTG
CCGGCGATCG GCCGGACCCT GCTCGGGGCC GAGCGCTTCG CCGCGCTGAC CCGCGAACTC
GGCCCCGGCG ACCATGCGGT GATGGTGGTG AGCCACGGTC CCGAGAACCC CCTCGGCGAG
GATTTCGTGC TGGGCTCGAT CCCCGACCGG CTGACGGTGA CGCAAGGGGG CCTCGCCGTG
AACGCCCGCG ACATGGCGAT CGAGCGGCGC GGCGCCGCGC CCGCCCTGCC GGACGGAGCC
TGGACGATCC TGCGGATCAC GGGGGCGGCG GGCTTCGACC CCTCCGCTCC CTGGACCCTG
ACGACGAAGC TCGTGCGCGA GCGCGGCCAG ATCTTCCCGG AAAAGATCGC CCGCGAGTTC
TCCGCCGATT ACGCGCTGCC CGCCGATCTC TTCGTCCGCG AGGCGGCGGA GGCGGGACCG
AGCTGGACCG ATCCGTGGCG GGCGCGCGGC GTCGAACTCG GCGTGATCGC GCTGGCGCTG
GCCGGGCTGG TACCGGTGCT GGCGCGCCAG CGCGGGCTCG TGGCCGACCG GCGCCGCTTC
CCCATGTTCC GGCTCGCCTA CCTCGCCTTC ACGCTCCTCT TCATCGGCTG GTCCGCGCAG
GCGCAGCTCT CCATCGTCAC CCTGGTCGGC CTCGTGCGCG CCGCCACCGT GACGCACGAC
CTCGCCTTTC TGCTCTACGA CCCGCCCTCG CTGCTGCTCT GGGCCTTCGT GATCGCCACG
CTCTTCGTTT GGGGCCGGGG CACCTTCTGC GGCTGGCTCT GCCCCTTCGG CGCATTGCAG
GAATTCGTCG CGTGGTTGGC CAAGCCCCTG CGCATCCGTC AGGTCACGGT ACCGCCGCGG
CTCGACCGCG CCCTGCGGCT GGCGAAATAC GTGGTGCTGG CCGGCATCCT TATCGCGGCG
GCAACGGGCT CGCCGCTCGC CGACAGCCTG TCCGAGGCCG AGCCGTTCAA GACCGCAATC
ACCCTGTATT TCGTCCGTGC CTGGCCGTTC GTCGCCTACG CGATTGGCCT GCTCGTCCTC
AACCTCTTCG TCTACAAGGG GTTCTGCCGA TACCTTTGCC CGCTCGGCGC GAGTCTGGCC
GTCCTCGGCC GGCTGCGGCT GCTCGATTGG ATACCCCGGC GGGCCGAATG CGGCAGCCCG
TGCCAGCTCT GCAAGGTGCG CTGCCGCTAC GGCGCGATCG GCGCTGACGG CCGCATCGAT
TATCCCGAGT GCTTCCAGTG CATGGATTGC GTCACGATCA TCCACGATCC CGGGCAATGC
GTGCCGGAGG TCGTCGCGCG CCGCCGCGGG CGGCGGATCG CGCTGCAGCC GGTCGCGGCG
GAGTGA
 
Protein sequence
MPARRASNLL RPALLALLAL LLAVPLAAAG TLDRAGMERY FPAPLVVGER DATLPVWPIL 
KQEAGSYEVF AYAFESIDLA PIPGFGGTPP DLLVALAPDG TFRDVRVVSH HEPVFLEGLG
SEPLFAFVEQ YVGMSARRPI RVGRPNARGS GAAPQTTVDG ISMATASTRV INESILAASL
AVARAKLGFG AANVGLKVEA RPDPGEAPTV AELTARGWLR RLTVSNERAE AAFRDAGVAG
AGDGPAAAPL IDLTFAYLNV PAIGRTLLGA ERFAALTREL GPGDHAVMVV SHGPENPLGE
DFVLGSIPDR LTVTQGGLAV NARDMAIERR GAAPALPDGA WTILRITGAA GFDPSAPWTL
TTKLVRERGQ IFPEKIAREF SADYALPADL FVREAAEAGP SWTDPWRARG VELGVIALAL
AGLVPVLARQ RGLVADRRRF PMFRLAYLAF TLLFIGWSAQ AQLSIVTLVG LVRAATVTHD
LAFLLYDPPS LLLWAFVIAT LFVWGRGTFC GWLCPFGALQ EFVAWLAKPL RIRQVTVPPR
LDRALRLAKY VVLAGILIAA ATGSPLADSL SEAEPFKTAI TLYFVRAWPF VAYAIGLLVL
NLFVYKGFCR YLCPLGASLA VLGRLRLLDW IPRRAECGSP CQLCKVRCRY GAIGADGRID
YPECFQCMDC VTIIHDPGQC VPEVVARRRG RRIALQPVAA E