| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4826 |
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| Symbol | |
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| ID | 6310473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 5151118 |
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| End bp | 5153094 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642653505 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001927457 |
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| Protein GI | 188584012 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.459633 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.588192 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACTAG CGGACACGAC GATCCTCGAG GGTCTTGAGA CGCCGGATCG TCTCCGGCTT
CTGCCGGAGA GCGAGCTGCA GCGGGTCGCC GACGCGGTGC GCGCCGAGAT GATCGACGCC
GTGTCGATCA CCGGCGGCCA TCTCGGCTCG GGGCTCGGCG TGGTCGAGCT GACGGTGGCG
CTCCACCACG TCTTCGACAC CCCCGACGAC CGCATCGTCT GGGACGTCGG CCACCAGTGC
TACCCGCACA AGATCCTCAC CGGCCGCCGC GACCGCATCC GCACGCTGCG CCAGGGCGGC
GGCCTGTCCG GCTTCACCAA ACGCTCGGAG AGCGTGTACG ACCCCTTCGG CGCGGCCCAC
TCCTCGACCT CGATCTCGGC CGCGCTCGGC ATGGCGGTCG CCCGCGACCT CGACGATGCC
GAGGCCCGGG CCAAGGGCGA GGCGCCGGGG AAGCGCCGCA ACATGATCGC GGTGATCGGC
GACGGCTCGA TGTCGGCGGG CATGGCCTAC GAGGCCATGA ACAATGCCGG CGCGCTGCAC
TCGCGCCTGA TCGTCATCCT CAACGACAAC GACATGTCGA TCGCGCCCCC CGTCGGCGCC
ATGTCGGCCT ATCTCGCGCG GCTGGCCTCC GGCGGCACCT ACCGGAGCTT GCGCGAGACC
GCCAAGCAGC TGGGAAAACT GCTGCCGAAG GCGCTCTACC AGCGCGCGGC GGCGGCGGAA
GAGTATGCCC GCTCGCTGAT CGTCGGCGGC GGCACGATGT TCGAGGAGAT GGGCTTCCAC
TATGTGGGGC CGGTCGACGG GCACAACCTC GACCACCTGC TCCCCGTTCT GAAGAACGTG
CGCGACTCGG ACCAGGGTCC GATCCTGCTC CACGTGGTGA CGCAGAAGGG CAAGGGCTAC
GCCCCGGCCG AGGCCTCGGC CGACCGCTAC CACGGCGTGG TCAAGTTCGA CGTGGTCTCA
GGCGTGCAGG CCAAGGCCAA GGCGAACGCC CCGGCCTATA CGCGGGTGTT CGGCGAGAGC
CTGATCAAGG CGGCCGATGC CGATCCGAAG GTGGTGGCGA TCACTGCGGC CATGCCCGGC
GGCACCGGCA TCGACCTGTT CGGCAAGGCG CATCCGGACA AGACTTTCGA CGTCGGCATC
GCCGAGCAGC ACGCGGTGAC CTTCGCCGGC GGTCTGGCGA CCGAGGGCTA CAAGCCGTTC
GTGGCGATCT ACTCGACCTT CCTGCAGCGG GCCTACGATC AGGTCGTGCA CGACGTGGCC
TTGCAGAACT TAGCCGTGCG GTTCTGCCTC GACCGGGCCG GTCTGGTGGG GGCGGACGGA
GCGACCCATG CGGGCGCGTT CGATCTGGCC TATCTCTGCT GCCTGCCGAA CATGACGGTG
ATGGCGGCCG CCGACGAGGC CGAGCTGGTG CACATGGTGG CCACCGCGCA TGCGCATGAC
TCGGGGCCGA TCGCCCTGCG CTACCCGCGC GGCGAGGGGG TCGGCGTCGA GCTGCCGGAG
AGCGGCGAGC CGCTGGCCAT CGGCCGCGGG CGTGTGGTGC GCCGTCCGGA AGGGGCGCGG
GTGGCGCTTC TGTCGCTGGG CACGCGCCTG TCGGAGGCTC TGAAGGCGGC CGACGCGCTG
GAGGCGGAGG GTGTTGCGGT GAGCGTGGCG GATGCCCGTT TTGCCAAGCC GCTGGATGCC
GAGCTGATCG TGGATCTGGC CAACAGCCAC GAGGTTCTGG TGACGGTGGA GGAAGGCTCG
GTCGGCGGCT TCGGCGCGAT GGTGCTGCAC CTTCTGTCGG AGCGGGGCGT TCTGGATGCG
GGCCGGGTCC GGGTGCGGAC GCTGACGCTG CCGGACGTCT ACCAGGACCA CGACAAGCCG
GAGAAGATGT ACGCCGAGGC CGGTCTCGAC GCCGAGGGCA TCCTCAAGGC CGTCCGCGCC
GCCCTGCCGG AAAAGGCGGT GCAGCGCGAA GGCAGCGTGG TGAACCTGAA GCGGTAA
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| Protein sequence | MALADTTILE GLETPDRLRL LPESELQRVA DAVRAEMIDA VSITGGHLGS GLGVVELTVA
LHHVFDTPDD RIVWDVGHQC YPHKILTGRR DRIRTLRQGG GLSGFTKRSE SVYDPFGAAH
SSTSISAALG MAVARDLDDA EARAKGEAPG KRRNMIAVIG DGSMSAGMAY EAMNNAGALH
SRLIVILNDN DMSIAPPVGA MSAYLARLAS GGTYRSLRET AKQLGKLLPK ALYQRAAAAE
EYARSLIVGG GTMFEEMGFH YVGPVDGHNL DHLLPVLKNV RDSDQGPILL HVVTQKGKGY
APAEASADRY HGVVKFDVVS GVQAKAKANA PAYTRVFGES LIKAADADPK VVAITAAMPG
GTGIDLFGKA HPDKTFDVGI AEQHAVTFAG GLATEGYKPF VAIYSTFLQR AYDQVVHDVA
LQNLAVRFCL DRAGLVGADG ATHAGAFDLA YLCCLPNMTV MAAADEAELV HMVATAHAHD
SGPIALRYPR GEGVGVELPE SGEPLAIGRG RVVRRPEGAR VALLSLGTRL SEALKAADAL
EAEGVAVSVA DARFAKPLDA ELIVDLANSH EVLVTVEEGS VGGFGAMVLH LLSERGVLDA
GRVRVRTLTL PDVYQDHDKP EKMYAEAGLD AEGILKAVRA ALPEKAVQRE GSVVNLKR
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