Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4801 |
Symbol | |
ID | 6310269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 5130464 |
End bp | 5132944 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 642653480 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_001927432 |
Protein GI | 188583987 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.510158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGC CTGTCCCCGC GCTCCCGATC GAGGCCGCCC TTCCCGCCCT GCGCGCGGCC CTGTCCGAAC GCGCCTCCGC CGTGCTCGTG GCCCCGCCCG GCGCCGGCAA GACCACGCGC GTGCCGCTCG CCCTGCTCGA AGAGTCCTGG CTCGGGGCGC AGAAAATCAT CCTGCTGGAA CCCCGGCGGC TCGCGGCGCG GGGCGCGGCT GAGCGCATGG CCGCGACTTT GGGTGAGCGG GTCGGCGAGA CGGTCGGCCT GCGGGTGCGG CTCGGCTCGA AGATTTCGGC CCGCACCCGG ATCGAGGTCG TCACCGAGGG CGTGTTCACC CGGATGATCC TCGACGATCC GGAACTGGTC GGCATCGGCG CCGTGCTGTT CGACGAGTTC CACGAGCGCT CCCTCGACGC CGACCTCGGG CTGGCCTTCG CCCTCGACGC GCAGGGCGCG CTGCGGGAGG ACCTGCGGAT CCTCGCCATG TCCGCGACCC TCGACGGGGC CCGCGTCGCG GGGCTTCTCG GCGACGCGCC GGTGGTGGAA TCGGAGGGGC GTGCCTTTCC CGTCGAGACC CGCCATCTCG ACCGCGAGGG CGGCGAGCGC ATCGAGGATG CGATGGCCGC CGCGATCCTG CGGGCGCTGC GGGCCGATCC CGGCTCGGTC CTGGCCTTCC TTCCGGGCCA GGCGGAGATC CGCCGCACCG CCGAGCGGCT GGCGGAGCGC CTGCCCGACG ACACCGACCT CGCCCCCCTC TACGGCGCGC TCACCCCGGG CGAGCAGGAC CGGGCGGTGG CCCCGGCGCC GCCGGGGCGG CGCAAGGTGG TGCTGGCGAC CTCCATCGCC GAGACCTCGC TGACGATCCA GGGCGTGCGC ATCGTCGTCG ATTCCGGGCT CGCCCGGGTG CCGCTCTACG AGCCCGGCAA CGGCATGACC CGGCTCGTCA CCGCGCGGGC CTCGCGTGCC TCGGTCGACC AGCGCCGGGG CCGCGCCGGG CGCACCGAGC CGGGGGTGTG CTGGCGGCTC TGGCCGGAGG CGGCGACCGC TTCCCTCGAA CCCTTCGCCC GGCCGGAGAT CCTGTCCGCC GACCTGGCCG GTCTGACCCT CGACTGCGCC GCCTGGGGCG TGACCGACCC GACCGCCCTG CCCTTCCTCG ACCCGCCGCC GGTGCCGGCG CTCGCGGAGG CGCGGGCGAT GCTGACCGAT CTCGGCGCCC TCGATCCCGA CGGGCGGCTC ACCGCCACCG GCCACACCCT GCGCAGCCTG CCGCTGCCGC CCCGGCTCGC CCGGATGGTC GCCCGCGCCG CCGAATCCGG CCAGGCCCGC GCCGCCGCGG ATCTCGCCGC CGTGCTGGTC GAGCGCGGGC TGGGCGGGGA TGCGGTCGAT CTCGCCGAGC GCCTGGACCG CTTCCGCCGC GACCGTGGCG GCCGGGCCGC CGACATGCGC CGCCTCGCCG AGGGTTGGGC GCGGCAGGCG GCCAAGGCAG CGGGGGCCGT GGCCGAGCCC GATCCGGCGC TTGCCGAGCC CGGCGCCCTG CTGGCGCTCG CCTATCCCGA CCGGGTGGCG CGGGCGCGGG GCCGCGACGG CGCCTTCCTG ATGGCCAATG GCCGCGCCGG CCTTGTCGAT CCGGCGAGTC CGCTCGCCCG CGAGCCCTTC ATCGTCGTCG CCGACCTCAC CGGCGCTGCG GCCTCCGCCC GCATCCTGTC TGCGGCCGCG ATGTCTTCCG AGTCCATCGA CGCGCTGTTT TCCGACCGCA TCGCGACCGT GCGCAGCGTC AGCTTCGACG GGCAGGCCCG TGCGCTCCGC GCCCGCGAGG GGCGCCGGCT CGGGGCCGTC ACGCTGGACG AGCGCACGAT GCCCGTTCCC GCCGACGCGG AGGCGGCGCG GGTGCTGGCC CGCGGCATCG CCAGCCTCGG CCTCGACCGC CTGCCCTGGA CGCCCGCCCT GGCGCAGTGG CGGGCGCGGA TCCGCTTCCT CCACGAGGCC GAGGGCGGGG AATGGCCGGA CCTCTCCGAC GCGGCCTTGG CCGAGAGCGT CGAGGACTGG CTGGCGCCGT CCCTCGTCGG GCGCACCGCG CTGGCGGCGG TCACCGCCGA CGATCTCGGC CAGGCCCTGC AGGGCCTGCT GCCCTGGAGC CTGCGCGCCC GCCTGGAGGC GGAGGCGCCG AGCCATATCG AGGTGCCGAC GGGCTCGCGC ATCCCGGTCG ATTACGAATC CGGCCCCGAG CCGGTGCTGG CGGTGCGGGT GCAGGAGCTG TTCGGCCTCG ACCGGCACCC GACCCTCGGC GGGGGCCGCG TGCCGCTGGT GCTCCACCTG CTCTCGCCGG CCCACCGCCC GATCCAGATC ACCCGCGACC TGCCGGGCTT CTGGCGCGGC TCCTGGGCCG CGGTCCGCTC CGAGATGCGC GGCCGCTACC CGCGCCACCC CTGGCCGGAG GACCCGCTCA GCGAGGCCCC GACCCGGCGG GCGAAGCCGA GAGGGACGTA A
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Protein sequence | MSSPVPALPI EAALPALRAA LSERASAVLV APPGAGKTTR VPLALLEESW LGAQKIILLE PRRLAARGAA ERMAATLGER VGETVGLRVR LGSKISARTR IEVVTEGVFT RMILDDPELV GIGAVLFDEF HERSLDADLG LAFALDAQGA LREDLRILAM SATLDGARVA GLLGDAPVVE SEGRAFPVET RHLDREGGER IEDAMAAAIL RALRADPGSV LAFLPGQAEI RRTAERLAER LPDDTDLAPL YGALTPGEQD RAVAPAPPGR RKVVLATSIA ETSLTIQGVR IVVDSGLARV PLYEPGNGMT RLVTARASRA SVDQRRGRAG RTEPGVCWRL WPEAATASLE PFARPEILSA DLAGLTLDCA AWGVTDPTAL PFLDPPPVPA LAEARAMLTD LGALDPDGRL TATGHTLRSL PLPPRLARMV ARAAESGQAR AAADLAAVLV ERGLGGDAVD LAERLDRFRR DRGGRAADMR RLAEGWARQA AKAAGAVAEP DPALAEPGAL LALAYPDRVA RARGRDGAFL MANGRAGLVD PASPLAREPF IVVADLTGAA ASARILSAAA MSSESIDALF SDRIATVRSV SFDGQARALR AREGRRLGAV TLDERTMPVP ADAEAARVLA RGIASLGLDR LPWTPALAQW RARIRFLHEA EGGEWPDLSD AALAESVEDW LAPSLVGRTA LAAVTADDLG QALQGLLPWS LRARLEAEAP SHIEVPTGSR IPVDYESGPE PVLAVRVQEL FGLDRHPTLG GGRVPLVLHL LSPAHRPIQI TRDLPGFWRG SWAAVRSEMR GRYPRHPWPE DPLSEAPTRR AKPRGT
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