| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4692 |
|---|
| Symbol | |
|---|
| ID | 6312629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 5009954 |
|---|
| End bp | 5010778 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 642653370 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001927323 |
|---|
| Protein GI | 188583878 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.169711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0760952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGC GCTTCGTCCT GCAAGGCCGA ACCGCCCTCG TCACGGGGGC CGCGAGCGGC
ATCGGCGCGG CCTTGAGCCT CGCGCTGGCC GGCCGCGGCT GCGCCCTCGC GCTCGCCGAC
CGGGACGCGC AGGGCCTCGC CGAAACGGCG CGGGCCGCCC GCGCCTCCGG CGTCGCGGTC
AGCGAGCATG TCCTCGACCT CGCCGACCGG GCGGCGCTCC TCGCGCTGCC GGAGGCGGTC
CGGTCCCGTC ATGGCGGCCT GCAGCTTCTC GTCAACAATG CCGGCGTGGC GCTCGGCGGC
CGGTTCGAGG AGACCGATCC CGCCGATATC GACTGGCTGA TGGACGTGAA CCTGCACGCG
GTGATGCGGC TGACCCATGC CTGCCTGCCG CTGCTGCGGG CCGAACCGCA GGCGCAGATC
GTCAACCTGT CGAGCGTGTT CGGCATCATC GCGCCGGCCG GGCAGGTGGC CTACGCGGCG
AGCAAGTTCG CCGTGCGCGG CTTCACCGAG GCCCTGCGCC ACGAGGTCGA GGGCACGGGG
CTCGGCGTCA CCCTGGTGCA TCCGGGCGGG GTCGCCACCG CCATCGCCCG CAACGCCCGC
ACGCCGCGCT CCATGAACCC GCAGGAGGCC GCCGCGGGGC TGGCCGCCTT CGAGCGCCTG
CTGACCCTGC GCCCGGAGAC CGCGGCCGCG GCGATCCTGC GCGGGATCGA GGCGCGGGCG
CCCCGGGTCG TGATCGGAGC CGATGCCCGC CGCGCCCTCT TGGTCCAACG GCTGATGCCG
GTGCGCTACT GGTCGCTGAT CCGCCGCGCC GTTCGGGACA CATGA
|
|---|
| Protein sequence | MAQRFVLQGR TALVTGAASG IGAALSLALA GRGCALALAD RDAQGLAETA RAARASGVAV
SEHVLDLADR AALLALPEAV RSRHGGLQLL VNNAGVALGG RFEETDPADI DWLMDVNLHA
VMRLTHACLP LLRAEPQAQI VNLSSVFGII APAGQVAYAA SKFAVRGFTE ALRHEVEGTG
LGVTLVHPGG VATAIARNAR TPRSMNPQEA AAGLAAFERL LTLRPETAAA AILRGIEARA
PRVVIGADAR RALLVQRLMP VRYWSLIRRA VRDT
|
|---|
| |