Gene Mpop_4663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4663 
Symbol 
ID6309491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4977952 
End bp4979313 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content66% 
IMG OID642653341 
ProductABC transporter nitrate-binding protein 
Protein accessionYP_001927294 
Protein GI188583849 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.807584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCCCT TCGACAATCC CTTCGACGCC AAACGCCGCT TCAGGCGCGG CGGCTGCTCC 
TGCGGGGCGC ATGAGAGCCA GGCCGCGCAC GAAGCGGCTC TGCCGGCCGG CGACGCCGCG
ATCGAGCGGG CGGTCGAGGC GACGATGCTG CGCGCCCTGT TCCCGCACGC GCCCGAGCGC
CGCGCCTTCC TCAGGAGCGT GGGGGCCGCG ACGGCGGCGG CGGCCGTCAG CCAGTTCCTG
CCGACGAAGT TCGTGGCCGA GGCCTTCGCC GAGGCGGGCA AGCCGGAGAA GACCGACCTC
AAGGTCGGCT TCATTCCGAT CACCTGTGCC ACGCCGATCA TCATGGCCAA GCCCATGGGC
TTTTACGAGA AGCAGGGTCT CAACGTCGAT GTGGTGAAGA CCGCCGGCTG GGCGGTGGTG
CGCGACAAGA CCCTGAACAA GGAATACGAC GCCGCCCACA TGCTGGCGCC GATGCCGCTC
GCGATCACTC TGGGTCTCGG CTCGAACCCG GTGCCCTTCG CGGTTCCGGC GATCGAAAAC
GTCAATGGGC AGGCAATTTG CCTCGCGAAT AAGCACAAAG ACAACCGCGA TCCGAAGAAC
TGGAAGGGCT TCAAGCTCGC CATCCCGTTC GATTACTCGA ACCACAACTA TCTGCTACGC
TACTACCTCG CCGAGCACGG CATCGATCCC GACACCGACG TGCAGCTCCG CTCCGTGCCG
CCGCCCGAGA TGGTCGCCAA CCTGCGGGCC GACAACATCG ACGGCTTCCT CGCCCCCGAC
AACGTGGTCC AGCGCGCGGT CTACGACGGC GTCGGCTTCA TCCACATCCT GTCGAAGGAG
ATCTGGGACG GGCATCCCTG CTGCTCCTTC TCGGTGGCGC AGGACACGAT CCGCGAGATG
CCGAACGCCA CGGCCGCTCT GCTGCGCGCC ATCCTCCAGG CCACCGCCTA CGCCTCGAAG
ACGGAGAACC GGAAGGAGAT CGCCGCGGCC ATCGCCCCGG CCAACTATCT CAACCAGCCG
GTCACGGTGG TCGAGCAGGT CCTCACCGGC ACCTATGCCG ACGGCCTCGG CAGCGTGAAG
AAGGACCCCA AGCGCGTCGC CTTCGACCCC TTCCCCTACG AAAGCTTCGC GATCTGGACC
CTGACCCAGA TGAAGCGCTG GGGCCAGATC AAAGGCGATG TCGATTACGC GGCGGTGGCC
CAACAGGTCT ACCGCGCCAC CGACGCCGCC AAGCTCATGA AGCAGGACGG GCTCACCCCG
CCCGAGGCGA CGACCAAGAC CTTCGTGGTG ATGGGCAAGA CCTTCGATCC GGCCAAGCCC
GCCGAATACC TCGACTCCTT CAAGATCAAG CGCGCGAGCT GA
 
Protein sequence
MAPFDNPFDA KRRFRRGGCS CGAHESQAAH EAALPAGDAA IERAVEATML RALFPHAPER 
RAFLRSVGAA TAAAAVSQFL PTKFVAEAFA EAGKPEKTDL KVGFIPITCA TPIIMAKPMG
FYEKQGLNVD VVKTAGWAVV RDKTLNKEYD AAHMLAPMPL AITLGLGSNP VPFAVPAIEN
VNGQAICLAN KHKDNRDPKN WKGFKLAIPF DYSNHNYLLR YYLAEHGIDP DTDVQLRSVP
PPEMVANLRA DNIDGFLAPD NVVQRAVYDG VGFIHILSKE IWDGHPCCSF SVAQDTIREM
PNATAALLRA ILQATAYASK TENRKEIAAA IAPANYLNQP VTVVEQVLTG TYADGLGSVK
KDPKRVAFDP FPYESFAIWT LTQMKRWGQI KGDVDYAAVA QQVYRATDAA KLMKQDGLTP
PEATTKTFVV MGKTFDPAKP AEYLDSFKIK RAS