| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4577 |
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| Symbol | mnmA |
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| ID | 6312677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4885407 |
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| End bp | 4886594 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642653256 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001927209 |
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| Protein GI | 188583764 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.969326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCA ACCGGCCCTC ATCACCGGCC ATGAACTCGC TGGATCTCCC GAAGCCCCCG
CACGAGACGC GCGTCGTCGT CGCCATGTCG GGCGGCGTCG ATTCGTCGGT GGTCGCCGGG
CTGTTGAAGC GCGAGGGCTA CGACGTCGTC GGCGTCACGC TCCAGCTCTA CGATCACGGC
GCGGCGACCC ACCGCAAGGG CGCCTGCTGC GCCGGCCGCG ACATCCACGA CGCGCGGGCG
GTGGCCGAGA CGCTCGGCAT CCCGCACTAC GTCCTCGACT ACGAGGACCG CTTCCGGGAA
TCGGTGATCG ACCGCTTCGC CGAGAGCTAT CTCTCCGGCG AGACGCCGAT TCCGTGCGTC
GAGTGCAACC GGTCGGTCAA GTTCCGCGAC CTGCTCGGGA TGGCCCGCGA TCTCGGCGCC
GAGGCGCTGG CGACGGGCCA TTACGTGGCG AGCCGGGCGC AGCCGGAAGG CGGGCGTGCC
CTCTACCGCG CCCTCGATCC GGCCCGCGAC CAGAGCTACT TCCTCTACGC GACGACCCCC
GAGCAGCTCG CCTTCCTGCG CTTCCCGCTC GGCGAGCGGC CCAAGGACGA GACCCGCGCG
CTTGCCCGCG AACTCGGCCT CGCGGTGGCC GACAAGGCCG ACAGCCAGGA CATCTGCTTC
GTGCCGCAGG GCGGCTATGC CGACGTGATC GCCAAGCTCA GGCCCGAGGC GGCCCGGCCC
GGCGAGATCG TCGATCTCGA CGGCCGCCGG CTCGGCGAGC ATGAGGGCAT CATCCACTAC
ACGGTGGGCC AACGCCGTGG CCTCAAGCTG TCGGTCGGCG AACCGCTCTA CGTGGTGCGG
CTGGAGCCCG AGACCGCCCG CGTCGTGGTC GGCCCGCGCG CGGCGCTCGC CACCCGCCGC
ATCCGTCTCA CCGACCTCAA CTGGCTCGGG AGCCGCGCAC CGGACGGCCT CGCCGATCTG
CCTGTGGCCG TGCGCGTGCG CTCGACCCGC GAGCCGCGGC CCGCGCGCCT GTCGTGGAAC
GCGGCCGAGG CTTGCCTCGA GGTCGAGCTG GTGGTCCCCG AGGACGGAGT CTCGCCGGGG
CAGGCCTGCG TGATCTACGC CGATGACGGC CCGCGCGCCC AGGTGCTCGG CGGCGGCACC
ATCCGGCGCA TCGGCGCGTT GCAGGCAGGC GCCGCCGAGG CCGCCTGA
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| Protein sequence | MAGNRPSSPA MNSLDLPKPP HETRVVVAMS GGVDSSVVAG LLKREGYDVV GVTLQLYDHG
AATHRKGACC AGRDIHDARA VAETLGIPHY VLDYEDRFRE SVIDRFAESY LSGETPIPCV
ECNRSVKFRD LLGMARDLGA EALATGHYVA SRAQPEGGRA LYRALDPARD QSYFLYATTP
EQLAFLRFPL GERPKDETRA LARELGLAVA DKADSQDICF VPQGGYADVI AKLRPEAARP
GEIVDLDGRR LGEHEGIIHY TVGQRRGLKL SVGEPLYVVR LEPETARVVV GPRAALATRR
IRLTDLNWLG SRAPDGLADL PVAVRVRSTR EPRPARLSWN AAEACLEVEL VVPEDGVSPG
QACVIYADDG PRAQVLGGGT IRRIGALQAG AAEAA
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