Gene Mpop_4540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_4540 
Symbol 
ID6310195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4846874 
End bp4847785 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content74% 
IMG OID642653220 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001927173 
Protein GI188583728 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.438902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACC GCGTGACGGG GATGCAGGTC TTTGTCCGGG TGGCGGCTTT GGGCAGCTTC 
TCGGCGGCGG GTCGGGCGCT CGGCCTGTCC CAGACCGGGG TCACCAAGCA CGTGGCGGCC
CTGGAGGCGC GGCTCGGCAC GCGGCTCCTG CACCGGACCA CCCGCCGCCT GACCCTGACC
GAGGCCGGCC GGACCTATCT CGAGGCCTGC GAGCGCATCC TCGCCGAGAT CGCGGAGGCC
GAGGCGGCGG TCGGCGCGGA GGCGGTGGAG GCGCACGGCA CCCTGCGGCT CAACGTGCCG
CTCTCCTTCG GCGTGCGCGA GATCGCCCCG GCGCTTTCGG ACTTCTCCAC CGCGCACCCG
GCGCTGACGA TCGAACTCGG CCTCAACGAC CGCCGGGTCG ACCTGATCGA GGAGGGCTGG
GACCTCGCCG TGCGGATCGG GGCGCTCGCC GATTCGGGGC TGATCGCCCG GCGCCTCGCC
GCCTGCCGCC TCGTGACCTG CGGTGCCCCC CGTTATTTCG AGCGGCACGG CACGCCGCAC
CGACCCGAGG AGCTGAAGCA CCACAACTGC CTCGGCTACA CCCTGTCCGA TGCCAGTGGC
TGGCGCTTCG GCGAGCAAGC CTATCCGGTC TCCGGCAACC TGCGGGCGCC GAACGGCGCC
GCCCTCACGG CCGCCGCGGT CGCGGGCCTC GGGCTGATCT ACCAGCCGAC CTTCCTGGTG
GCGCAGGCCC TGCGCGCGGG CACCCTCGTC GCCCTCGATC TCGGCGCGCC CTGCCCCGTC
CTGCCGATCC ACGCCCTGAT GCCGCCGGGC CGCCGCCCGG CCAAGACCCG CGCCTTCGTG
GACTTTCTGG CGCAACGGTT CGCAGGCGAG CCGGCCTGGG AACGGGGATT GCCGGTGGCG
GTGCGGGGAT GA
 
Protein sequence
MLDRVTGMQV FVRVAALGSF SAAGRALGLS QTGVTKHVAA LEARLGTRLL HRTTRRLTLT 
EAGRTYLEAC ERILAEIAEA EAAVGAEAVE AHGTLRLNVP LSFGVREIAP ALSDFSTAHP
ALTIELGLND RRVDLIEEGW DLAVRIGALA DSGLIARRLA ACRLVTCGAP RYFERHGTPH
RPEELKHHNC LGYTLSDASG WRFGEQAYPV SGNLRAPNGA ALTAAAVAGL GLIYQPTFLV
AQALRAGTLV ALDLGAPCPV LPIHALMPPG RRPAKTRAFV DFLAQRFAGE PAWERGLPVA
VRG