| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4514 |
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| Symbol | |
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| ID | 6309694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | - |
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| Start bp | 4814754 |
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| End bp | 4816478 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 642653194 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001927147 |
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| Protein GI | 188583702 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.221149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGGGC CGCCCACGCG GGGTGGCCTT AACGGAACGC TGTCCGGCCG CATGTCCGCC
CTCGCCGCCC CGTCGCCTCC GGCCACCCCG TCGTTCGCGG CGGCGCTGGC CGAGATGGCC
GTCCCGCTTC TCCTGCTCGA CGCCGCCGGC ACGATCACCT TCGCCAATGC CTGCGCGGCG
GCGCTGCTCG CCTGCCCCGC GCCGGCCGGC CTTCCCCTCC CCGCTCTGCT GGCGGCCTGC
GGTGCCGCGG AGCCGGAGGG CGGCATCCTT CCGGAGGCGC TGCGCGCTGC GCGGCCCGTC
CGGTCGCGCC TCACCCTCGG CGACCGCCTC GTGGAGGCCG CGCTGGCGCC GCTCTCGTCC
GGCGGCTTCG CCCTCACCTT CGAAGACGTG ACCGAGTTGC TGCGCGGCGC GGCTCTGGCG
CGGCAGGAGC CGCTCACCGG CCTGTGCAAC CGCGTCGGCC TGCACGACCG CCTCGACGCG
GCGCTGGCCG AGGCCGCCCG GACGGACGCG CCGCTCGCGG TGCTGATGCT CGACCTCGAC
CGGTTCAAGG CGGTCAACGA CACCCTCGGC CACCCGGTCG GCGACGCGCT CCTGCGCAAG
GTCGCCGAGC GCCTGCGCAA GGCCACCCGC AGCGGGGACG TCGTGGCGCG GCTCGGCGGC
GACGAATTCG CCATCATCCA AGGCGGGCCC TCCTCCGGCG CCGAGCAGCC GCAGGCGGCC
GAAGCCCTGG CGCGCCGCCT CGTCGATCTC GTCGGGCGCA CCTACGTCGT CGACGGCCAC
ATGCTCAATG TCGGCGTCAG CGTCGGCGTC GCGCTCAGTC CCGCCGACGG GCGCAACGCC
GACGACCTCC TGAAGCATGC CGACCTCGCC CTCTACCGGG CCAAGGCCGA GGGCCGGGGC
ACCCACCGCT TCTTCGAGCC GGCGATGAAC GCGCAGATGC AGGCGCGCCG CAGCCTCGAG
ATCGACCTGC GCCGGGCGCT CGCCCTCAAG CAGTTCGACC TCGCCTTCCA GCCGCAGATC
CAGCTCGAAA CGGGGCAGAT CGTGGGCTTC GAGGCGCTGC TGCGCTGGAA CCATCCCGAG
CGCGGCCCGG TCTCGCCCGC CCTGTTCATT CCGCTGGCCG AGGAGATCGG CCTCATCGTC
GGCATCGGCG AATGGGCCCT GCGCACCGCC TGCCGCGAGG CGGCGGGCTG GACGCAGCCC
GCCTCGATCG CCGTGAACCT GTCTCCGGTG CAGTTCCGCG GCGGCCGGCT GGTCGAGACC
GTGATGCACG TGCTCGCCCA GACCGGCCTC GACCCGGCCC GGCTGGAACT GGAGATCACC
GAAGGCGCGC TCTTGGAGAA CACGGACAGC GTGCTCGACG TGCTGAACGG CCTGCGCGCG
CTGGGCGTGA AAATCTCGAT GGACGATTTC GGCACCGGCT ACTCCTCCCT GAGCTACCTG
CAGAAATTCC CCTTCGACAA GATCAAGATC GACCAATCCT TCGTCCGCGG CATGGAGGGC
AATGCCGAGT GCGGGGCGAT CGTGCGGGCC ATCGCCCGGC TCGGCGCCAG CCTCGGCATG
CGCACCACCG CGGAAGGGGT CGAGACCGCG ACGCAGCTCG ACGCCATCCG CGCCGAGGGC
TGCACCGAGG TCCAGGGCTA CCTGACCGGG CGTCCGATGC CCGCCGCCCA GGCCGCCGCC
CTGCTCATTC CCTCCCCCGC CGCCCTTCCC GCCGACGCCG CCTGA
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| Protein sequence | MEGPPTRGGL NGTLSGRMSA LAAPSPPATP SFAAALAEMA VPLLLLDAAG TITFANACAA
ALLACPAPAG LPLPALLAAC GAAEPEGGIL PEALRAARPV RSRLTLGDRL VEAALAPLSS
GGFALTFEDV TELLRGAALA RQEPLTGLCN RVGLHDRLDA ALAEAARTDA PLAVLMLDLD
RFKAVNDTLG HPVGDALLRK VAERLRKATR SGDVVARLGG DEFAIIQGGP SSGAEQPQAA
EALARRLVDL VGRTYVVDGH MLNVGVSVGV ALSPADGRNA DDLLKHADLA LYRAKAEGRG
THRFFEPAMN AQMQARRSLE IDLRRALALK QFDLAFQPQI QLETGQIVGF EALLRWNHPE
RGPVSPALFI PLAEEIGLIV GIGEWALRTA CREAAGWTQP ASIAVNLSPV QFRGGRLVET
VMHVLAQTGL DPARLELEIT EGALLENTDS VLDVLNGLRA LGVKISMDDF GTGYSSLSYL
QKFPFDKIKI DQSFVRGMEG NAECGAIVRA IARLGASLGM RTTAEGVETA TQLDAIRAEG
CTEVQGYLTG RPMPAAQAAA LLIPSPAALP ADAA
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