| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4291 |
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| Symbol | |
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| ID | 6311730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4576685 |
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| End bp | 4577554 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642652976 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001926932 |
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| Protein GI | 188583487 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.307947 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.943502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTCA AGGGCAAGAG CCTGAAGGGT AAGACGCTGT TCATCACCGG CGCCTCGCGC
GGCATCGGGC TCGCCATCGG CCTGCGCGCC GCCCGCGACG GCGCCAACGT CGCCATCGCC
GCCAAGACCG CCGAACCGCA CCCGAAGCTC GAAGGCACCA TCTTCACCGC CGCCGAACAG
ATCGAGCGGG CCGGCGGCCG GGCGCTGCCG CTCACCGTGG ATGTCCGCGA CGAAGACGCC
GTGAAGGACG CCCTCGACCG AACCGCGAAG GAGTTCGGCG GGATCGACAT CGTGGTCAAC
AATGCGAGCG CGATCTCGCT GTCGAACACG CCCAAGACCG AGATGAAGCG CTTCGACCTG
ATGCATCAGA TCAACGCGCG CGGCACCTAC ATGACCAGCA AATACGCGAT TCCCCATCTG
GAGCGGGCCG AGAACCCGCA CATCCTGATG CTCTCGCCGC CCCTCGACAT GGCGGAGCGC
TGGTTCGCGC CGCATCTGGC CTACACCATG GCGAAGTTCG GCATGTCGCT CTGCGTGCTG
GGGCTTGCCG GCGAACTTCG AAGCAGGGGG ATCGCGGTCA ACGCCCTGTG GCCGCGCACC
ACCATCGCCA CGGCCGCGGT GCAGAACCTG CTCGGCGGCG ATGCCCTGAT GCAGGCGAGC
CGCCGGCCCG AGATCATGGC GGATGCCGCC CACGCCGTGT TCCTGAAGGA CGCCCGAAAC
TTCACCGGGC GCTTCCTGAT CGACGACACG TTCCTCTCCG AGGAAGGCGT CACGGAGTTT
TCAAAATACC GCGTCACAGC GGGCGTCCCG CTTGCGCCGG ACTTCTTCGT GCCGGAGACA
AGCCTCGCCC CGCCCGGGGC GCTCGACTGA
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| Protein sequence | MSLKGKSLKG KTLFITGASR GIGLAIGLRA ARDGANVAIA AKTAEPHPKL EGTIFTAAEQ
IERAGGRALP LTVDVRDEDA VKDALDRTAK EFGGIDIVVN NASAISLSNT PKTEMKRFDL
MHQINARGTY MTSKYAIPHL ERAENPHILM LSPPLDMAER WFAPHLAYTM AKFGMSLCVL
GLAGELRSRG IAVNALWPRT TIATAAVQNL LGGDALMQAS RRPEIMADAA HAVFLKDARN
FTGRFLIDDT FLSEEGVTEF SKYRVTAGVP LAPDFFVPET SLAPPGALD
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