Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_4000 |
Symbol | |
ID | 6312056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 4267227 |
End bp | 4269125 |
Gene Length | 1899 bp |
Protein Length | 632 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 642652698 |
Product | protein of unknown function DUF224 cysteine-rich region domain protein |
Protein accession | YP_001926657 |
Protein GI | 188583212 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.427516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCG TCATCCCCCT GACCACGGTG TTTCCCGGCC TCGTCTGGCT GATGGCGGCG CTTGCCCTCG TCCAGGTCGC GCGCCGGGCC GCACTCTGGC GCGTCGGGGC GGCGGCGCCG GTGGCGTGGC TCGACGGGCT CGCCAAGCTG CCCCGGCGCT ACCTCGTCGA TGTCCACCAC GTCGTGGCGC GCGACGCCTA CGCGTCCCGC ATGCACGCGG TCGTGGCCGG CGGCCTGCTC GCAGCCTCGA TCCTGACCGC GCTGGCGATC CTGCCGCCGC TCGCCGGTTT CCGGCCCTAC TGGTTCCTCG TGGCAGCCGC CTTCGCCGTC ACGGCGGCCG GCGCGCTGCT CGTCGGCGCC CGGCGCTATC CGGCCAAGCC GAAGCGCCTC TCGGCCGGAC GCTTCCAGAT CCTGCCGTTC CTGCTCGTCG CCTACGCCGT CGGCGGCACG GCGACCGCGC TGCTGCTCGC CCTCGGCGGC GGCGGCCTGT TCGGTTCCGT TGCGCTCGCG CTTGCGGCGG CGGGCGGCCT CGGCCTCGCC TTCGAGGTGC GGCACGGACC GATGCGCCAC GCGGCGGCCG GCGCGCTCCA TCTCGTCGCC CATCCCCGGC CCGGACGGTT CGAGGGGCGC CCCGACACCG CGCTCCAGCC GCTCGACCTC GACGCGCCGC GGCTCGGCTC GGAGATGCCG GCCGACTTCA CCTGGAACCG GCTGTTGTCC TACGACGCCT GCGTGTCCTG CGGGCGCTGC GAGACCGCCT GCCCGGCCTT CGCCGCCGGC CAGCCGCTGA ACCCGAAGAA ACTCGTCCAG GATCTCGTCG CCGGCCTCTC GCCCGCCGAA CCGCGTTACG CCGGCAACCC CTATCCCGGC GGCCGGGCGG GGCAAGGCGA GCGCGGGGCG CTGGCCCGGC TGATCGGGCC GGACGCGCGC ATCCACCCGG ACACGTTGTG GTCCTGCACC ACCTGCCGCG CCTGCGTCGA GGAATGCCCG ATGATGATCG AGCATGTCGA CGCGGTGGTC TCATTGCGCC GCCACCAGAC CCTGGAGCAG GGGGCGCTGC CCGAGAAGGC GGTCGTGCCG GTGACCGAAC TGCGTCAGGC CGGCGATCCC GGCGGGCGGC CGCTGGCCTC CCGCACCGAC TTCGCCGCCG GTGTCGAGCT GCCGCGCCTC GCCGATCGCG GAGGCGCCGA GATCCTGCTC TGGCTCGGCG AGGGCGCCTA CGACCTGCGC TACGGCCGTT CGCTCCGCGC CCTGGTGCGG CTCCTGCGCG AGGCGCAAGT CGATTTCGCG GTTTTGGGCC CGGAGGAGCG CGACACCGGC GACCTCGCCC GGCGGCTGGG CGACGAGGCG ACCTTCCAGG CGCTGGCGCG GGCGAACATC GCGACCCTGG CAAAACACCG CTTCGAGCGG ATCGTCACCG CCGACCCGCA CGCGCTGCAT GCCCTGCGCA ACGAGTACCC GGCGCTCGGC GGGCGCTACA CGGTCGTGCA CCACACCGCC TTCCTGCTGG AGCTGATCCA GGCGGGCAAG CTCAACCCCG GCCGCCTGCC GGACCTCGCG GTGACCTATC ACGACCCCTG CTATCTCGCC CGCTACAACG GGGAGACCGA GGCGCCCCGC GCCGTGCTCG ACGCGATCGG CGTCGCCCGC AGCGAGATGA CCCGTTCCGG GCGCCGGGCG ATGTGCTGCG GCGGTGGCGG CGGCGCGCCG GTGAGCGACG TGCCGGGCGA GCGGCGCATC CCCGACATCC GCATGGCCCA GGCCGCCGAG ACCGGCGCCG GGATCGTGGC GGTGGCCTGT CCCTCCTGCA CGGCGATGCT GGAGGGCGTC ACCGACCGCA AGGCGGAGAT CCGCGACGTG GCCGAATTGC TGCTCCAGGC GGTGGAGGCG GGCCGATGA
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Protein sequence | MTSVIPLTTV FPGLVWLMAA LALVQVARRA ALWRVGAAAP VAWLDGLAKL PRRYLVDVHH VVARDAYASR MHAVVAGGLL AASILTALAI LPPLAGFRPY WFLVAAAFAV TAAGALLVGA RRYPAKPKRL SAGRFQILPF LLVAYAVGGT ATALLLALGG GGLFGSVALA LAAAGGLGLA FEVRHGPMRH AAAGALHLVA HPRPGRFEGR PDTALQPLDL DAPRLGSEMP ADFTWNRLLS YDACVSCGRC ETACPAFAAG QPLNPKKLVQ DLVAGLSPAE PRYAGNPYPG GRAGQGERGA LARLIGPDAR IHPDTLWSCT TCRACVEECP MMIEHVDAVV SLRRHQTLEQ GALPEKAVVP VTELRQAGDP GGRPLASRTD FAAGVELPRL ADRGGAEILL WLGEGAYDLR YGRSLRALVR LLREAQVDFA VLGPEERDTG DLARRLGDEA TFQALARANI ATLAKHRFER IVTADPHALH ALRNEYPALG GRYTVVHHTA FLLELIQAGK LNPGRLPDLA VTYHDPCYLA RYNGETEAPR AVLDAIGVAR SEMTRSGRRA MCCGGGGGAP VSDVPGERRI PDIRMAQAAE TGAGIVAVAC PSCTAMLEGV TDRKAEIRDV AELLLQAVEA GR
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