| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3993 |
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| Symbol | |
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| ID | 6312049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 4258864 |
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| End bp | 4261851 |
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| Gene Length | 2988 bp |
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| Protein Length | 995 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642652691 |
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| Product | sarcosine oxidase, alpha subunit family |
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| Protein accession | YP_001926650 |
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| Protein GI | 188583205 |
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| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGC CGTTCAGATT GTCCCGCGGC GGACGCATCG ACCGCAGCCG CCCCATCGTC
CTCACGTTCA ACGGCAAGCC CGTCCACGGC TATGCCGGCG ACACCGTCGC CTCGGCGCTC
TTGGCCAACG GCATCCACCT CGTCGGGCGC TCGTTCAAGT ATCACCGCCC CCGCGGCATC
CTGAGCCACG GCCCCGACGA GCCGAGCGCG CTGCTCTCCG TCGATCGCGG GCCCGGCCGG
ATCGACCCGA ACAACCGCGC CTCCGTGGTC GAGGCGCGCT CGGGGCTCCG CACGACCTCG
CAGAACCACT GGCCGTCGCT CGAATTCGAT GTCGGCGCGG TCAACGACCT CTTGTCGCCG
GTCTTCGTGG CGGGCTTCTA CTACAAGACC TTCATGTGGC CCCGGACGTT CTGGGACCGG
GTCTACGAGC CGTTCATCCG CGCCGCCGCC GGTCTCGGCA AGGCGCCGAC GGTGGCCGAT
CCCGACCGCT ACGCCAACCG CCACGCCCAT TGCGACGTGC TGATCGTCGG CGCCGGCCCG
GCGGGTCTCG CCGCCGCGCT CGCCGCGGCC CGCACCGGCA AGCGGGTGAT CCTCGCCGAC
GAGGGCGCGG AGCCCGGCGG CGCGCTCCTG CACGACACGA CGTCCGAGAT CGACGGACGC
CCGGCGGCCG ACTGGCTCGC CGAGACGCTG ACCGAGCTCG ATGCCCGCGA GAACGTCATC
CTGCTGCCCC GGACCACCGC CTTCGGTTAC TACAACCACA ACCACGTGGC GATGACCGAG
CGCGTCACCG ACCACCTGAC CTCCACCGCC GGCCAAGCGC CCCGCGAGCG CCTGTGGCAG
GTGCGGGCGG AACAGGTCGT GCTCGCCGGC GGCGCCCATG AGCGCCCCCT CGTCTTCGCC
GACAACGACC GGCCGGGCAT CCTGCTCGCC GAAAGCGTGC GGGTCTTCCT CAACCGCTAC
GGCGTGGCGC CGGGCCGCCG GCTCGTCTTC GCCACGAGCG GCGCCTCCGC CTACCGGGCC
GCACTCGATG CGCGCGCGGC GGGCCTCGAC GTCACCCTCG TCGACCTGCG CCTGGAAGCG
GATTGCGGGC CGGAGCTGGC GCAGTTGCGC GCGGCCGGGG CCGACGTGTT GACCGGCCAC
ACCGTGGTCG GATCGAAGGG CCGCAAGCGC GTCACGGGTC TCATCGTGGC GCCTGTCGGG
AGCGACGGCC GGTGCGGCGG CCGTCGCCTT CTCGCCTGCG ATTGCGTCGG CATGTCCGGC
GGCTGGACGC CCGCCGTCCA CCTGTTCTCG CAGTCCCGCG GCAAGCTCGC CTACGACGAG
GCGATCGATG CCTTCGTACC GAGCCGCTCG GCGCAAGAGG AGCGCTCGGC GGGTGCGGCC
CGCGGCACCT ACGACCTCGC CGCCTGCCTT GGCGACGGCT TCGCCGCCGG CGCTGCCGCC
GCGGGCTCCG AGGCGCGTCA GGACTTCAAG GCGACAGCGA CGCTCACAGG CTTCCAGCCG
GTGCGGATCA TGCCGACCGA CGCCGACCCG ACCAAGGTCC GCGCCTTCGT CGACTACCAG
AACGACGTCA CCGCCAAGGA CATCAAGCTC GCGGTCCGCG AGGGCTTCCA GTCGATCGAG
CACGTCAAGC GCTACACCAC GACCGGCATG GCGACCGATC AGGGCAAGAC CTCGAACATG
AACGCGCTCG GCATCGTCGC CGGGCAGCTC GACAAGGCGC TGCCGGCGGT GGGCACCACC
ACCTTCCGGC CGCCCTACAC CCCGGTGACC TTCGGCGCCC TGGTGGGCCC CGCCCGCCAC
GCCCTGTTCG ATCCGATCCG CACCACCCCG ATCCACGAAT GGGCGGAGGC GCACGGCGCC
CTGTTCGAGA ACGTCGCCCT GTGGCGGCGG GCCTGGTACT TCCCCAAGGA CGGCGAGGAC
CTGCACGCGG CGGTCGCCCG CGAGTGCAAG GCGGTGCGCG AGGGCGTCGG CATCTTCGAC
GCCTCGACGC TGGGCAAGAT CGAGATCGTC GGCCGGGACG CGGCCGAGTT CATGAACCGC
CTCTACATCA ACCCCTGGAC CAAGCTCGCC CCCGGACGCT GCCGCTACGG GCTGATGCTC
AAGGAGGACG GCTACATCCT CGACGACGGC GTCGTCGCCC GCGTCTCGGA CACCTGCTTC
CACGTCACCA CCACGACCGG CGGCGCCGCC CGCGTGCTGG CCCATATGGA GGACTACCTC
CAGACCGAAT GGCCGGAGCT CGAGGTGTTC CTGACCTCGA CCACCGAGCA ATGGGCGGTG
ATCGCGCTCC AGGGCCCGAA GGCCCGCGAC GTGATCGCGC CGCTGGTCGA CGGCATCGAC
CTCTCGCCGG AGGCCTTTCC GCACATGGCG ATGCGCTCGG GCACGATCTG CGGCGTGCCG
ACCCGGCTGT TCCGGGTCTC GTTCACCGGC GAGCTCGGCT TCGAGATCAA CGTCCCCTCC
GACCACGCCC GCGCGGTCTG GGAGGCGGTG TTCGAGGCGG GCCGGGCTCA CGGCATCACG
CCCTACGGCA CCGAGACGAT GCACGTGCTG CGCGCCGAGA AGGGCTACAT CATCGTCGGC
CAGGAAACCG ACGGCACGGT GACCCCGGAC GATGTCGGCA TGGCCGGGAT GATCCCGAAG
GCCAAGGGGG ACTTCGTCGG CAAGCGCTCG CTGGCGCGCC CCGACGTGGT GGCGTCGGGC
CGCAAGCAGC TCGTCGGGCT CGTGACCGAC GATCCCAAGC TCGTCCTCGA CGAGGGCGCG
CAGATCGTAC CAGACACCGG TCAGCCGATC CCGATGCGCA TGCTCGGCCA CGTCACGTCG
AGCTACTGGA GTGCCAATTG CGGACGCTCC ATCGCGCTCG CCCTGGTCGA GGGCGGCCGC
GCGCGGATGA ACGGGCATCT CCACGTCACC ACGCCGGACG GCTTTACCCG CGTCACCGTC
TGCGAACCGG TCTTCTTCGA CGTCAAGGGG GAGCGCATCC ATGCTTGA
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| Protein sequence | MAQPFRLSRG GRIDRSRPIV LTFNGKPVHG YAGDTVASAL LANGIHLVGR SFKYHRPRGI
LSHGPDEPSA LLSVDRGPGR IDPNNRASVV EARSGLRTTS QNHWPSLEFD VGAVNDLLSP
VFVAGFYYKT FMWPRTFWDR VYEPFIRAAA GLGKAPTVAD PDRYANRHAH CDVLIVGAGP
AGLAAALAAA RTGKRVILAD EGAEPGGALL HDTTSEIDGR PAADWLAETL TELDARENVI
LLPRTTAFGY YNHNHVAMTE RVTDHLTSTA GQAPRERLWQ VRAEQVVLAG GAHERPLVFA
DNDRPGILLA ESVRVFLNRY GVAPGRRLVF ATSGASAYRA ALDARAAGLD VTLVDLRLEA
DCGPELAQLR AAGADVLTGH TVVGSKGRKR VTGLIVAPVG SDGRCGGRRL LACDCVGMSG
GWTPAVHLFS QSRGKLAYDE AIDAFVPSRS AQEERSAGAA RGTYDLAACL GDGFAAGAAA
AGSEARQDFK ATATLTGFQP VRIMPTDADP TKVRAFVDYQ NDVTAKDIKL AVREGFQSIE
HVKRYTTTGM ATDQGKTSNM NALGIVAGQL DKALPAVGTT TFRPPYTPVT FGALVGPARH
ALFDPIRTTP IHEWAEAHGA LFENVALWRR AWYFPKDGED LHAAVARECK AVREGVGIFD
ASTLGKIEIV GRDAAEFMNR LYINPWTKLA PGRCRYGLML KEDGYILDDG VVARVSDTCF
HVTTTTGGAA RVLAHMEDYL QTEWPELEVF LTSTTEQWAV IALQGPKARD VIAPLVDGID
LSPEAFPHMA MRSGTICGVP TRLFRVSFTG ELGFEINVPS DHARAVWEAV FEAGRAHGIT
PYGTETMHVL RAEKGYIIVG QETDGTVTPD DVGMAGMIPK AKGDFVGKRS LARPDVVASG
RKQLVGLVTD DPKLVLDEGA QIVPDTGQPI PMRMLGHVTS SYWSANCGRS IALALVEGGR
ARMNGHLHVT TPDGFTRVTV CEPVFFDVKG ERIHA
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