| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3963 |
|---|
| Symbol | |
|---|
| ID | 6312107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4226315 |
|---|
| End bp | 4226995 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642652666 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001926625 |
|---|
| Protein GI | 188583180 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.408958 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.426773 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTCGG GACCGCTCTC GCCGTGGCTC TACGCCGGCC TGATCGAGGT CAGGCTGCCG
GCGATCTGCG CCGAGACCCG TCACATGCAC GCCGCCCTCT CGGCGCGCAT CAACAAGACC
GACCGCAACG ACGCCCCGGG CATCGCGCAG ATGATGCGGG TCGGGCTGTT CAAGCCGGTC
CACGTCAAGA CGCCGGCCAG CCAGCAGCGC CGCCTACTCC TGACCTCGCG CAAGCTCCTG
CAGCGCAAGG CCTACGACAT CGAGAGCGAC CTGCGCGGCC AGCTGCGCAA CTTCGGCCTC
AAGGTCGGCG TCGTCGGGGC GGTGGGCTTC GAGCAGCGCG TGCGCGACCT CGTGCTCGAT
CTGCCCTTCG TCGCCGCCGT GATCCTGCCG CTGTTGGAGG CGCGCGCGGC GCTTCGGACT
CAACTCGCCA AGCTGCACAA GATGCCGCTG GAGCAGGTCC GCACCGACCC AGTCTGCCGG
CGATTGATGA CCGCGCTCGA AGTGGGGCCG GTCGTGGCGC TGACCAACCG CACCTGCGTC
GACAACCCGG CCCTCGTGGC CGTTGCCCGC AAGTCGGAGA TCTCCGCCAC CTTGCACGCC
AGCGCCAAGC TCTTGCCCTG GGTTGTCTGC ACCTCGATCT GGCGCAGCGT CAGCACCACC
TGCTCCGCGC TCGTCTTCTG A
|
|---|
| Protein sequence | MESGPLSPWL YAGLIEVRLP AICAETRHMH AALSARINKT DRNDAPGIAQ MMRVGLFKPV
HVKTPASQQR RLLLTSRKLL QRKAYDIESD LRGQLRNFGL KVGVVGAVGF EQRVRDLVLD
LPFVAAVILP LLEARAALRT QLAKLHKMPL EQVRTDPVCR RLMTALEVGP VVALTNRTCV
DNPALVAVAR KSEISATLHA SAKLLPWVVC TSIWRSVSTT CSALVF
|
|---|
| |