| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3772 |
|---|
| Symbol | |
|---|
| ID | 6312175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 4018616 |
|---|
| End bp | 4020025 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642652484 |
|---|
| Product | Amidase |
|---|
| Protein accession | YP_001926445 |
|---|
| Protein GI | 188583000 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.312194 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGCG ACTTCGACTT CATGACCGCG CTTGAGTTGC GCCGCCTTAT CGCGGCGCGC
GCGATTTCGC CGGTAGAGCT GACGGAGCGC GCCCTCGCGC GTGCCGAGGC TAGCCAAGCC
TCCTTGAATG CCTTCTGCCA CCTGGTGCCG GAGGAAGCCC GCAGCGCCGC GCGCCGGGCC
GAGGAGGCTG TGATGCGCGG CGCGCCTCTC GGGCTGCTCC ACGGCCTGCC CGTCTCGGTG
AAGGATCTGA TCGCGGTGGG TGGCCAGCCC TACGCGTCCG GCTCGCGGGC CATGGCGAGC
AACATCGCCG CCGCCGATGC CCCCGCCGTC GAGCGCCTGC GTGCCGCCGG CGCCATCATC
ATCGGGAAGA CCACCACGAG CGAGTTCGGA GCCAAGCCCG TCGGCGACTC GCCGCTCACC
GGCATCACCC GCCATCCCTG GGATCTGGCG AAGACGCCGG GTGGATCGAG CGCCGGCGCG
GCCGCCTCGG TGGCAGCCGG GATCACGCCC TGCGCACTCG GCACCGACGG TGGCGGCTCC
CTGCGCATTC CCGCCGCGCT GACGGGTCTC GTCGGGTTCA AGGCGCAATT CGGGCGGGTT
CCGGTCTGGC CGACCTCGGC AACGCCGACG CTGGCCCATG TCGGCGCGCT TGCTCGCAAC
GTCGCCGATG CCGCCTTGCT GACGACGGCG GTCGCCGGCC ACGATCCGCG CGATCCCTTC
GCGGTGGCCG GCCCCGTCCC AGACCTTCTG GTGGCGGTCA AGGCTTCCAT CGCCGGCCTC
CGGGTCGCCT GGAGCGCGAC ACTCGGCTAC GCGCGGCCCA ACCCTGAGGT TGCCGCCATC
GCCCATGCCG CTGCGATGGC GCTGGCAGAC CAGGGCGCGA TCGTGGAAGA GGTCGAGACC
GTCCTCGAGT CCGATCCAGC CGCTCTCTGG ACGGCCGAGT TCTACGCCGG CATCGGCACC
CGCCTGCGCG GCGTTCTCGA AAGCCGCCGC GATCTCCTGG ACCCCGCTGT CGCCGATTTG
CTCGACGCCG CCCTCGCTCA GGAGATGCGC GCCTATTACG AGACCGTCTT CGCACGCTAC
GCGCTGCGGG ACCGGATGGT CAACTTCTTC ACCGGCTACG ATGTCCTCGT GTCACCGACA
CTGCCGATCT CGTCCTTGGA AGCAGGCAGA AACATCCCGG AGGGGCTGGA AGATCGCAGC
CTCGTCTCCT GGGCATTCTA CACCTATCCT TTCAACCTCA CAGGCCAGCC CGCGGTCTCT
GTCTGCGCAG GGATTGCCTC GGATGGAATG CCCGTCGGCC TCCAGATCGT GGGCCGCACT
CTCGGCGAAT ACGACGTGAT GCGAGCGGCT GCGGCGATCG AGCGGACGAA GCCGCCGGGC
TATAATCTTC GTCCGCTGAC AGAGCCGTGA
|
|---|
| Protein sequence | MTSDFDFMTA LELRRLIAAR AISPVELTER ALARAEASQA SLNAFCHLVP EEARSAARRA
EEAVMRGAPL GLLHGLPVSV KDLIAVGGQP YASGSRAMAS NIAAADAPAV ERLRAAGAII
IGKTTTSEFG AKPVGDSPLT GITRHPWDLA KTPGGSSAGA AASVAAGITP CALGTDGGGS
LRIPAALTGL VGFKAQFGRV PVWPTSATPT LAHVGALARN VADAALLTTA VAGHDPRDPF
AVAGPVPDLL VAVKASIAGL RVAWSATLGY ARPNPEVAAI AHAAAMALAD QGAIVEEVET
VLESDPAALW TAEFYAGIGT RLRGVLESRR DLLDPAVADL LDAALAQEMR AYYETVFARY
ALRDRMVNFF TGYDVLVSPT LPISSLEAGR NIPEGLEDRS LVSWAFYTYP FNLTGQPAVS
VCAGIASDGM PVGLQIVGRT LGEYDVMRAA AAIERTKPPG YNLRPLTEP
|
|---|
| |