Gene Mpop_3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3770 
Symbol 
ID6312173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp4017043 
End bp4017780 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content68% 
IMG OID642652482 
ProductABC transporter related 
Protein accessionYP_001926443 
Protein GI188582998 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.463504 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CTCCGCTTCT CTCGGTCGAG AACCTCGAAG TCCGCTACGG CGCGGCAACC 
GCGCTCCGCG GTGCGAACCT GACCGTGCAG CGCGGCCAGC TGGTCGCCGT GATCGGCAAT
AACGGTGCCG GCAAGACCTC GCTGATGCGC GGGATCACCG GCCTCGTACG ACCGAGCGGC
GGCCGCGTTC TGTTCAAGGG CGAGGAGGTC ACGCGGCTGC CCGCCCATGC CAAGGTCGCC
CGCGGTCTCG CGATGGTGCC CGAGGGACGC CTGATCTTCC CCGACCAAAC CGTCGAGGAC
AATCTGATAC TGGGTGCCTA CACCCATGGC GGCCTCAAGA ACGCGCAGGC GAAACGGACG
CTGGAGCGGG CGCTCGCGCT CTTCCCGCGC TTGCGCGAGC GGCTGCGCCA GCCTGCCGGC
AGCATGTCGG GCGGCGAGCA GCAGATGCTC GCCATCGCCC GCGGTCTGAT GGCCGAACCC
GACCTCCTCG TGATCGACGA ACTCTCGCTC GGCCTCGCGC CCCGCGTCGT CGAGCAACTC
ATTGGCGTCT TGCGCGACCT CAACGGCCAA GGCCTCACCA TTCTTCTCGT CGAGCAGCTC
GCATCCTACG CGCTCGCCAT CGCCGACCAT GCCTACGTGG TGGCGCAGGG GCGCACGGTG
CGGGACGGCC CGAGCGGGCT CATCGCCCGC GATCCGGAGG TCATGGAGAC CTTTCTCGGC
AAGAAGAAAG CCGCCTGA
 
Protein sequence
MTDTPLLSVE NLEVRYGAAT ALRGANLTVQ RGQLVAVIGN NGAGKTSLMR GITGLVRPSG 
GRVLFKGEEV TRLPAHAKVA RGLAMVPEGR LIFPDQTVED NLILGAYTHG GLKNAQAKRT
LERALALFPR LRERLRQPAG SMSGGEQQML AIARGLMAEP DLLVIDELSL GLAPRVVEQL
IGVLRDLNGQ GLTILLVEQL ASYALAIADH AYVVAQGRTV RDGPSGLIAR DPEVMETFLG
KKKAA