Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3611 |
Symbol | |
ID | 6311768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3856449 |
End bp | 3857003 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642652333 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_001926295 |
Protein GI | 188582850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00310361 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0495451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCTGT TCTGGCGCAA GGGCTTTGCG GCGACCTCCA TCTCCGACCT GACCGCGGCG ATGGGGATCG GCTCGCCAAG TCTCTACGCG GCCTTCGGCT CGAAGGAGGC ACTCTATGCC GAGGCCCTGC GCCACTACCG GGCGCAGTTC GAGGGGCGCG TCTGGGGCAA CTTCGCCGCG GCTGCCACCG CGCGCGGGGC GGTCGAGGCT CTGCTGATGG ACACGGCCTC GGCCCTGACC GCGGTCTGCG CGCCCGAGGC ACCGCGCGGC TGCATGGTGA CGCTCTCGGC CGTCGGCGGC GAGGGGCAGG CGGAACTCGG CGCGTGCGTG CGGGCGGCGC GCGCTCTCGG ATTCGAGACC GTCGTGGAAC GGCTCGACCG CGCCGCGGCG GCGGGGGAAC TCGGCGCCGT GGTCGATATC CCGGCGCTGG CCCGCTTCGT GATGACGGTG CAGGGCGGGA TGTCGCTCCA GGCCCGCGAC GGGGCGAGCT GGGCGGAACT CGAAGCGGTC GCGCGTCTGG CGATGGCAGG GTGGGACGCG CGGACCGGCG GCTGA
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Protein sequence | MHLFWRKGFA ATSISDLTAA MGIGSPSLYA AFGSKEALYA EALRHYRAQF EGRVWGNFAA AATARGAVEA LLMDTASALT AVCAPEAPRG CMVTLSAVGG EGQAELGACV RAARALGFET VVERLDRAAA AGELGAVVDI PALARFVMTV QGGMSLQARD GASWAELEAV ARLAMAGWDA RTGG
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