Gene Mpop_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3611 
Symbol 
ID6311768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3856449 
End bp3857003 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content74% 
IMG OID642652333 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001926295 
Protein GI188582850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00310361 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0495451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCTGT TCTGGCGCAA GGGCTTTGCG GCGACCTCCA TCTCCGACCT GACCGCGGCG 
ATGGGGATCG GCTCGCCAAG TCTCTACGCG GCCTTCGGCT CGAAGGAGGC ACTCTATGCC
GAGGCCCTGC GCCACTACCG GGCGCAGTTC GAGGGGCGCG TCTGGGGCAA CTTCGCCGCG
GCTGCCACCG CGCGCGGGGC GGTCGAGGCT CTGCTGATGG ACACGGCCTC GGCCCTGACC
GCGGTCTGCG CGCCCGAGGC ACCGCGCGGC TGCATGGTGA CGCTCTCGGC CGTCGGCGGC
GAGGGGCAGG CGGAACTCGG CGCGTGCGTG CGGGCGGCGC GCGCTCTCGG ATTCGAGACC
GTCGTGGAAC GGCTCGACCG CGCCGCGGCG GCGGGGGAAC TCGGCGCCGT GGTCGATATC
CCGGCGCTGG CCCGCTTCGT GATGACGGTG CAGGGCGGGA TGTCGCTCCA GGCCCGCGAC
GGGGCGAGCT GGGCGGAACT CGAAGCGGTC GCGCGTCTGG CGATGGCAGG GTGGGACGCG
CGGACCGGCG GCTGA
 
Protein sequence
MHLFWRKGFA ATSISDLTAA MGIGSPSLYA AFGSKEALYA EALRHYRAQF EGRVWGNFAA 
AATARGAVEA LLMDTASALT AVCAPEAPRG CMVTLSAVGG EGQAELGACV RAARALGFET
VVERLDRAAA AGELGAVVDI PALARFVMTV QGGMSLQARD GASWAELEAV ARLAMAGWDA
RTGG