| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3575 |
|---|
| Symbol | |
|---|
| ID | 6311668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 3815505 |
|---|
| End bp | 3816308 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642652297 |
|---|
| Product | Invasion associated locus B family protein |
|---|
| Protein accession | YP_001926259 |
|---|
| Protein GI | 188582814 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0837139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCTTG CCAAGTCTTC CATGGCCAAG CCTTCCGCGC GCCCGCTGCG CGTGGCCGCG
ATCCTCGCCA TGGCGGGCCT GGGTGCCGGC CTGGGCGGAA CCGCGCTCGC TCAGAAGAAG
CCGGCCGCCC CGGCGCCGAC CCCCGCGCCC GCGCAGGCCC AGCCGGCCGC GCCCGCCCAG
CAGCAGGCTC AGGCCAACGG CCCGCAGCTC ATCAACGTGA AGTCCGAGCC GAGCCAGGCC
GACTGGACCA AGGTCTGCGG CAAGGATCAG GGCTCAGGCA CCGACGTCTG CTACACCACC
CGCGACTTCG TCTCGGATTC CGGCCAGCCG GTGCTCGCGG TCGCGCTCTA CGACATGAAG
AACGCCTCCA CGAAGCAGGA GGTGAAGGTC GTCCGCTTCC TGCTGCCGCT CGGCCTGATG
CTGGCCCCCG GCATGCGCTT CGACGTCGAC GGCAAGGAAG TGACCGGCGG CAAGTTCGCC
GTCTGCTTCC CCAACGGCTG CTTCGCCGAG GCCGGCGGCG TCTCAAACGA GCTGCTGAAC
GGCTTCAAGA AGGGCACCAC GCTCAACGTC CGGGTTCAGA ACCAGACCCA GCGCGAAGTG
GTGTTCGCGG TGCCGCTCGC CGGCTTCGGC AAGGCCTTCG ACGGCCCGGC CATCGACCCG
AAGGTGCTCG AGGAGCAGCA GAAGAAGCTC CAGGCCGAGA TGGAGAAGCG CAGCGAGGAA
ATGCGCAAGA AGCTGGAGCA GCAGGGCTCG GCCGGTGCCG CTCCCGCCCC GGCTGCCCCG
GCCGCCAGCG CCGCGCCGAA GTAA
|
|---|
| Protein sequence | MFLAKSSMAK PSARPLRVAA ILAMAGLGAG LGGTALAQKK PAAPAPTPAP AQAQPAAPAQ
QQAQANGPQL INVKSEPSQA DWTKVCGKDQ GSGTDVCYTT RDFVSDSGQP VLAVALYDMK
NASTKQEVKV VRFLLPLGLM LAPGMRFDVD GKEVTGGKFA VCFPNGCFAE AGGVSNELLN
GFKKGTTLNV RVQNQTQREV VFAVPLAGFG KAFDGPAIDP KVLEEQQKKL QAEMEKRSEE
MRKKLEQQGS AGAAPAPAAP AASAAPK
|
|---|
| |