Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3572 |
Symbol | |
ID | 6311598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3809195 |
End bp | 3810463 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642652294 |
Product | ABC transporter substrate-binding protein |
Protein accession | YP_001926256 |
Protein GI | 188582811 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.536665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGACG ATAAGGGCAA GGATCGCGAA AAGGGTCTGG ACTCGGCCCT GCGGCGCAAG CTTCTGATGG GCCTCGCGGG CCTGCCCGCC CTGGCGATGA TGCCGCGGGG GGCGTTCGCC GCCGCGCCGA CCTCGGCCGT CAACACGACC GGGCTCGCCG TGACCGATAC CGAGGTCACG GTCGGCATCC TGCACTCGGC CACCGGCACG ATGGCGATCT CCGAGACCGG CTCGATCCAG GCGGAGAAGC TCGCCATCGC CCAGATCAAC GAGATGGGCG GCGTGCTCGG CCGCAAGATC AAGATCATCC AGGAGGACGG CGCCTCCGAC TGGCCGACCT TCGCCGAGAA GGCCAAGAAG CTCCTCGTCA ACGACCATTG CGCCGCGGTG ATGGGCTGCT GGACCTCCGC CTCGCGGAAA GCTGCGCTGC CGGTCTTCGA GCAGTATAAC GGCCTGCTCT ACTACCCGAC CTTCTACGAG GGCCTGGAGC AGTCCAAGAA CGTGATCTAC ACCGGCCAGG AGGCGACCCA GCAGATCCTC GCCTCCCTCG ACTGGGTGGC GAAGGAGAAG GGCGCGAAGT CGTTCTTCAT GGTCGGCTCG GACTACATCT GGCCGCGCAC CTCGAACAAG ATCGCCCGCA AGCACATCGA GAACGTGCTC AAGGGCACGG TCGCCGGCGA GGAATACTTC CCGCTCGGCC ACACGCAGTT CAACTCGGTC ATCAACAAGA TCAAGCTCAA GAAGCCCGAC GTGATCTTCG CCGACGTCGT CGGCGGCTCC AACGTCGCCT TCTACAAGCA GCTCAAGGCG GCGGGCATCG ACCTCTCGAA GCAGACCCTG CTGACGATCT CGGTCACCGA GGACGAGATC GACGGCATCG GCGGCGACAA CATCGCCGGC GCCTATTCCT GCATGAAGTA CTTCCAGTCG CTGAAGAACC CGAACAACGA GAAGTTCGTG GCCGCCTTCA AGAAGATGTG GGGCGACAAG ACCGTCATCG GCGACGTGAC CCAGGCCGCC TATCTCGGCC CGTTCCTGTG GAAGATGGCG GTCGAGAAGG CCGGCTCCTT CGATGTCGAC AAGGTGGTCG AGGCCTCCCC CGGCATCGAG TTCAAGGAGG CGCCGGAAGG CTACGTGAAG ATTCACCCGA ATCATCACCT CTGGTCGAAG ACCCGCGTCG CCAAGGCCCT GCCGAACGGC CAGTTCGAGG TGGTCTACGA GAGCCCCGAG CTGATCGAGC CGAACCCCTT CCCGAAGGGG TACCAGTAG
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Protein sequence | MADDKGKDRE KGLDSALRRK LLMGLAGLPA LAMMPRGAFA AAPTSAVNTT GLAVTDTEVT VGILHSATGT MAISETGSIQ AEKLAIAQIN EMGGVLGRKI KIIQEDGASD WPTFAEKAKK LLVNDHCAAV MGCWTSASRK AALPVFEQYN GLLYYPTFYE GLEQSKNVIY TGQEATQQIL ASLDWVAKEK GAKSFFMVGS DYIWPRTSNK IARKHIENVL KGTVAGEEYF PLGHTQFNSV INKIKLKKPD VIFADVVGGS NVAFYKQLKA AGIDLSKQTL LTISVTEDEI DGIGGDNIAG AYSCMKYFQS LKNPNNEKFV AAFKKMWGDK TVIGDVTQAA YLGPFLWKMA VEKAGSFDVD KVVEASPGIE FKEAPEGYVK IHPNHHLWSK TRVAKALPNG QFEVVYESPE LIEPNPFPKG YQ
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