Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3217 |
Symbol | |
ID | 6310521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 3446281 |
End bp | 3447597 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642651939 |
Product | nucleotide sugar dehydrogenase |
Protein accession | YP_001925903 |
Protein GI | 188582458 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1004] Predicted UDP-glucose 6-dehydrogenase |
TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCATCG CGATGATTGG GTCGGGCTAT GTGGGCCTGG TGTCGGGCGC CTGCCTCGCC GATTTCGGCC ACGAGGTCGT CTGCATCGAC AAGGATCCAG CCAAGATCGC CGCCCTCAAC GAGGGCCGCA TGCCGATCTA CGAGCCCGGC CTCGACGCAC TGGTCGCCGA GAACGTCCGC CAGAAGCGCC TCGCCTTCTC CACCGACCTC AAGCCCGCCG TGGCAGGGGC CCAGGCCGTC TTCATCGCGG TCGGCACGCC GTCGCGCCGC GGCGACGGCT TTGCCGACCT CTCCTACGTC TACGCCGCAG CGCGTGAGAT CGCCGAGGCC CTCACCGGCT ACGCCGTCGT CGTCACCAAA TCGACCGTGC CGGTCGGCAC CGGCGACGAG GTCGAGCGCA TCCTGCGCGA GGCCCGCCCC GACCTCGATA TCGGCGTCGC CTCCAACCCC GAATTCCTGC GCGAGGGCGC CGCCATCGGC GACTTCAAGC GCCCCGACCG CATCGTCATC GGCGCCGAGG ATGCCCGCGC GGCCGCCGTC ATGCAGGAGG TCTACCGCCC GCTCTACCTC AACCAGGCGC CGATCCTGTT CACCGGCCGG CGCACGGCCG AGCTGACCAA GTACGCCGCC AACGCGTTTC TGGCCACCAA GATCACCTTC ATCAACGAGA TCGCCGATCT GTGCGAGCAG GTCGGCGCCA ACGTGCAGGA GGTCGCCCGC GGCATCGGGC TCGACAACCG CATCGGGTCG AAGTTCCTGC ATGCGGGTCC GGGCTATGGC GGCTCGTGCT TCCCCAAGGA CACGCTGGCG CTGGTGAAGA CGGCGCAGGA TTACGGCACG CCGGTTCGGA TCGTCGAGAC GGTGGTGGCG GTCAACGACC AGAGGAAGCG CGCGATGGCG CGCAAGGTGA TCGCGGCCTG CGGCGGATCG GTGCGGGGCA AGCGGGTGGC GCTGCTGGGC CTGACGTTCA AGCCGAACAC CGACGACATG CGCGACGCGC CGTCGCTCTC GATCATCGCC GGCTTGCAGG ATGCCGGCGC CCGGATCGTG GCCTACGATC CGGAAGGGAT GGAGCAGGCG CGGCCGCTTC TTCAGGGCGT GGACTATGCC GAGGATGCCT ATGCCTGCGC CGAAGGGGCG GACGCGCTGG TGATCGTGAC GGAGTGGAAC GCGTTCCGGG CTCTCGATCT GGCGCGGCTG AAGGCGATGA TGGCCGCCCC CGTCCTCGTC GACCTGCGCA ACGTCTACGC GCCCGACGAG GCCCGCCGCC ACGGCCTGCG CCATGTCGGC GTCGGGGCTC TGGCCAGCCG CGATTGA
|
Protein sequence | MRIAMIGSGY VGLVSGACLA DFGHEVVCID KDPAKIAALN EGRMPIYEPG LDALVAENVR QKRLAFSTDL KPAVAGAQAV FIAVGTPSRR GDGFADLSYV YAAAREIAEA LTGYAVVVTK STVPVGTGDE VERILREARP DLDIGVASNP EFLREGAAIG DFKRPDRIVI GAEDARAAAV MQEVYRPLYL NQAPILFTGR RTAELTKYAA NAFLATKITF INEIADLCEQ VGANVQEVAR GIGLDNRIGS KFLHAGPGYG GSCFPKDTLA LVKTAQDYGT PVRIVETVVA VNDQRKRAMA RKVIAACGGS VRGKRVALLG LTFKPNTDDM RDAPSLSIIA GLQDAGARIV AYDPEGMEQA RPLLQGVDYA EDAYACAEGA DALVIVTEWN AFRALDLARL KAMMAAPVLV DLRNVYAPDE ARRHGLRHVG VGALASRD
|
| |