| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3200 |
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| Symbol | |
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| ID | 6310599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3431364 |
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| End bp | 3432890 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642651923 |
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| Product | phytoene desaturase |
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| Protein accession | YP_001925887 |
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| Protein GI | 188582442 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.177165 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGACAC TCGCCGTCAA GCCGATGGAC GCGCACGGCC CCGATGCCCG GCCGCACGCG
GTGGTGATCG GCTCCGGCTT CGGCGGGCTG GCGGCGGCGG TTCGCCTCGG CGCGCGCGGC
TACCGCGTCA CCGTTCTGGA ACGGCTCGAC CAGCCGGGCG GCCGCGCCCG CGTCCACCGG
CAGGACGGCT TCACGTTCGA TGCCGGGCCG ACCATCGTGA CCGCGCCGTT CCTGTTCGAG
GAACTGTGGC GCCTGTGCGG ACGGGAGATG CACGAGGACG TCACCCTCGT GCCGATGCAG
CCGTTCTACC GCATCCGCTT CGAGGACGGC GAGAGCTTCG CCTATAGCGG CGACCGCGCG
GCCATGCGGG CGGAGGTCGC CCGCTTCTCG CCGGACGACG TGCCCGGCTA CGAGCGCTTC
ATGGCCCACA GCGAGGCGGT GTGCCGGCTG GGCTTCGAGG AACTCGGCCA TGTCCCGTTC
GGCAGCCTCG GCTCGATGCT GCGCATCGCG CCCGACCTCC TGCGACTCTC CGGCCACCGC
AGCGTCTACG ACGTGGTCGC CCGCTTCATT CGGAACGAGC GGCTGCGCAC CATCTTCAGC
TTCCACCCCC TGCTCATCGG CGGGAACCCG TTCCGCGCCA GCGGGATCTA CTGCCTCATT
GCCCATTTGG AACGGCAATG GGGCGTCCAT TTCGCCATGG GCGGCACCGG GCGGCTGGTG
GAGGGGCTCT GCGGGCTGAT CCGGGGACAG GGCGGGACGA TCCGCTGCGG CGCGGAGGTG
TCGCGCATCC GCGTCGAGGG CGGGGCCGCG ACCGGTATCG TGCTGGCGGA CGGCGAGACC
ATCCCCGCCG ACGTCGTCGT CTCGAACGCC GATTCCGCCT TCACCTACGG CACGCTTCTG
GGCGGCACGA CCCGGCGCTG GAGCACGCGG CGGCTCGCAC GAGCCTCGTC CTCGATGGGC
CTGTTCGTCT GGTACTTCGG CACCCGGAAA AAGTACCCGA AGGTCGATCA CCACATGATC
CTGATGGGCC CGCGCTACCG CGGCCTGCTG CAGGACATCT TCGACCGCAA GCACTTGGCG
GACGATTTCA GCCTCTACCT CCACCGCCCG ACCGCGACCG ACCCGCTGCT CGCCCCGCCC
GGGCACGACG CCTTCTACGT CCTCGCTCCG GTGCCGAACC TCGCCGGCGG CCAGGACTGG
GCGCGGCTCG CCGAACCGTA CCGGCAGAGG ATCGCCCGCT TCCTCGAAGA CGCGGTGCTG
CCGGGGCTCT CCGACGCCCT CGTCACCTCG CGGGTGACGA CGCCGCAGGA CTTTTCCGAC
GACTTCCTGA GCTTCCGCGG CTCGGGCTTC GGGCTGGAGC CGGTGCTGAC GCAATCGGCG
TGGTTCCGCC CGCACAACCG CTCCGAGGAC GTGGCCAACC TCTTCCTCGT CGGCGCGGGG
ACGCATCCCG GCGCCGGCCT GCCGGGGGTG CTGTCCTCGG CCCGTGTCCT CGATACCGTG
GTGCCGGATG CCCGTGTTCG CGCTTGA
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| Protein sequence | MLTLAVKPMD AHGPDARPHA VVIGSGFGGL AAAVRLGARG YRVTVLERLD QPGGRARVHR
QDGFTFDAGP TIVTAPFLFE ELWRLCGREM HEDVTLVPMQ PFYRIRFEDG ESFAYSGDRA
AMRAEVARFS PDDVPGYERF MAHSEAVCRL GFEELGHVPF GSLGSMLRIA PDLLRLSGHR
SVYDVVARFI RNERLRTIFS FHPLLIGGNP FRASGIYCLI AHLERQWGVH FAMGGTGRLV
EGLCGLIRGQ GGTIRCGAEV SRIRVEGGAA TGIVLADGET IPADVVVSNA DSAFTYGTLL
GGTTRRWSTR RLARASSSMG LFVWYFGTRK KYPKVDHHMI LMGPRYRGLL QDIFDRKHLA
DDFSLYLHRP TATDPLLAPP GHDAFYVLAP VPNLAGGQDW ARLAEPYRQR IARFLEDAVL
PGLSDALVTS RVTTPQDFSD DFLSFRGSGF GLEPVLTQSA WFRPHNRSED VANLFLVGAG
THPGAGLPGV LSSARVLDTV VPDARVRA
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