| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_3105 |
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| Symbol | |
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| ID | 6310892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 3335885 |
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| End bp | 3339028 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642651831 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001925795 |
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| Protein GI | 188582350 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.224612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGCA TGTCCAAGGT GCTGAATGAC GACGGCGCCC GCCGCGATGC GATCAGCCTC
CATGATCGCT CGATCCTGGT CGAGGCCGGC GCGGGTTCGG GCAAGACCGC CGTCATGGCC
GGCCGCATTG CCGCCATGCT CGCCGAAGGC GTCGCGCCGC GTTCCATCGC CGCCGTCACC
TTCACCGAAC TCGCCGCGAG CGAGCTGCTG TCCCGTGTCC GCGAGTTCGT CGCCGACCTC
TCGGTCGGCA CGATTGCGAC CGAACTGCGC GTGGCGCTGC CTGATGGGCT CACTCAGACC
CATCGCGACA ATCTCGCCGC CGCCAGCGCA GCGATCGACG AAATAACCTG CTCGACCATC
CACGGCTTCT GCCAGCGCCT GATCAAGCCC TATCCGGCGG AAGCCGACAT CGATCCCGGC
GCCAGCGTCA TGGACCGCAA CCACGCCGAT TTCACTTTCC TTGACATTGT CGATGGCTGG
CTGCGCGAAC GCCTGTCCGG CGGCCAGGGC GGCATTCTGG CCGAGATGGT GCTGCACAGC
CCCAGCGAGA CCGTGGCGCT CATCCACAAA ATCGCTGAGA ATCTGCGCCG CCGCCCCACG
CTCGCGGCCC CACCCGTCTC CCCGCTCGAC GGGTGCCTGA CGACGTTCCG GCAGGCCGCC
GCGGATTTCG CGAGCTTCAT GGATGGCGCG GCTGCGGCCG AACCCGAAAC GGTGACGATC
GTCGAGCGCC TGGCCGAAAT GGCGACCGCC GTGGCGAACG GTCCCGATCC CGCGACGCCG
GCGGGCCTCG TTCGCCTCCT GACCGCGCGT CCCCACCCGG ACCTTTGCAC CAAGGCCGGC
GCCTTCGCCT CCTACCGCAA AAAGGGCAAA TGGGCCGCCG CGGCCAAGGA GGCTGGTCTT
TCCAAGGCTG ACGGTGATCG GCTGAACGAC GCCGCAGAAA CCCATTACAC CGCCTGCTGC
GACGCCTGGG TCGCGCTCGT GCAAGCGGCC GCCGGCCATG CCCTTGCGGC GCTGATCGAC
GAAGCGCGTC CGATCCTGCA ACGCTATCGC GACCACAAGC GCGCCAGCGC CCAGCTCGAT
TTCGACGATC TGATTTTCGC CGCGCGCGAC TTGCTGCGCG ACCATGATGC CGTGCGCCGG
GCACTGGGGC AGCGTTTCGC CCATGTCCTC GTCGACGAGT TCCAGGACAC CGATCCCCTG
CAAACCGAAA TCTTCTGGCG ACTCTGCGGC GAGCCGGTCG ATGGCGATGA CGACTGGATC
TGGTTCCAAA TCCGGCCGGG CGCGCTCTTC CTGGTCGGCG ACCCCAAGCA GGCGATCTAT
CGCTTCCGGG GCGCCGATGT CGGCGCCTAT GTGCAGGCGC GCGACGCCTT CCGAGCCCAG
AACCCCGGCA GCCTCCTGTC GATCTCCACC AATTTCCGCT CCTGCGCCTC GATCCTCACC
TTCGTCAACG AGCGCTTCGA GGCCGTGCTC TCGGCCGATG GGCAGCCGGG CTTCACCGCT
CTCGACCCGT TCCATGATGA CCGGGGCGGC CTGTGCGTCG CGGCCCTCGA CATCGCCGTG
GCCGACGAAA ACGGCAAGGC CAGCGCCGAG CGGCAGCGTG ACGCCGAAGC CGACGCCATC
GCTGAGCTGT GCGCCCGGCT GATCGAAAGT CACCCCATCG TCGACCGTCG CAGCGGCTCG
GAACGTCCCT GCCAGCCGGG CGACATTGCC TTGCTGGCGC CGACCGGCGC GGAGCTGTGG
CGCTACGAGG AGGCCCTGGA GCGCCGCGGC ATCCCCGTGG CGACCCAGGC CGGCAAGGGG
CTGTTCCGCC GCCAGGAAAT CCAGGATCTC ATCGCCCTGA CCCGCGTCCT GGCCGATCGC
CGCGACACGC TCGCGCTCGG CGCGCTGCTG CGCGGGCCTC TGGTCGGCCT CACCGAGGAA
GAGCTTCTGG ACATCATCTG GGGGCTACCG CGCTCAGAGG AACGGCCGGA TCGGATTCCG
CGCCTTGATC TCAGCATCGA CCCCGCTGTC ATCGCGCACC CGCTCGCTCG CGAGGTCATC
GAGCGGCTGC AATCGCTCTC CCGGCGCGGT AACAGCACGA CCCCGCATGA GCTGCTCTCG
CATGCCGTGG ACGTGATGCG CGTCCGCCCG CTCCTCCTCG AGCGCCATCG CGGCCAAGCC
GAGCGCGCGC TCGCCAATAT CGATCTCTAT CTCAGCCTGT CGACCGGCTA CGCCGTGCGC
GGCCTGCGCG CCTTCGCCGA GGCGATGACA GCGGCGTGGT CCGACGAGGC GCGCGCCGTC
GAGGGCCGAC CCGACGCGCA GGAGGAAGCG GTCGCGCTCT TCACCATGCA CGCGGCCAAG
GGGTTGGAAT GGCCGATCGT CATTCCAGTC AACACCATGA CTGGTGTCAT GGCGCCCGAT
AACGCGGTCG TCGACCGCCA GACGGAAACC TTCTTCTGCC CGGTCCTGGG CATCCCGCCT
GAGGGATATG AGACGGCGCG TGAGGCGGAA AAGGACGAAC TGGATCGCGA ACGTATCCGC
CTCTGGTACG TCGCGGCCAC CCGCGCCCGC GAACTCCTCG TCCTCCCCCG GCTCGACACC
ACGCCCTCGA AATCCGCCTG GATCGGTCTC GTCGATCTGT CGCTCGCCGA ACTGCCCGGC
TTGGACGTCT CCCAGCTGCC TGCTGGCCTC ACGGCCACTG GAGCGGGTGT GGGCAACACC
CAGACGCGCG CGAGCTTCGC CGCCGAAGCC GAAACCATCG CCGCCGCGCA GACGCGGCTG
ACCTGGCTTG CGCCCAGCCG CGACGAAAAC GCCGCAGGGA CTGTGCTGCG GGAAGAAGAA
GCCGCGCTCT GGACGGGATC AGCCGACGAC CAGCCTCCCG AGCTGGAAGC AGCCGCTTTC
GTACAGGGCG GCCGGGAACG CGGGCTGATC CTCCACAAAT TGATGGAAGA GGTGCTGACC
GGCGAAACCC TAGAGGCGGA AGCCGCCCTG ACCGAACGGG CGGCGGACCT CATCCGCGCC
CTCGGCCGGT CTTCGGTCGC CGACCCGGCG ACGGGGCTGT CGGCTCAGGA ACTGGCGGCC
TGTGTCGCCC GGACCCTGGC CCTGCCCGAC ATCGCAGCCC TGCGGCCGGG TCTTCTGGCC
GAATTTCCCG TCTATGCCGC ATAG
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| Protein sequence | MSSMSKVLND DGARRDAISL HDRSILVEAG AGSGKTAVMA GRIAAMLAEG VAPRSIAAVT
FTELAASELL SRVREFVADL SVGTIATELR VALPDGLTQT HRDNLAAASA AIDEITCSTI
HGFCQRLIKP YPAEADIDPG ASVMDRNHAD FTFLDIVDGW LRERLSGGQG GILAEMVLHS
PSETVALIHK IAENLRRRPT LAAPPVSPLD GCLTTFRQAA ADFASFMDGA AAAEPETVTI
VERLAEMATA VANGPDPATP AGLVRLLTAR PHPDLCTKAG AFASYRKKGK WAAAAKEAGL
SKADGDRLND AAETHYTACC DAWVALVQAA AGHALAALID EARPILQRYR DHKRASAQLD
FDDLIFAARD LLRDHDAVRR ALGQRFAHVL VDEFQDTDPL QTEIFWRLCG EPVDGDDDWI
WFQIRPGALF LVGDPKQAIY RFRGADVGAY VQARDAFRAQ NPGSLLSIST NFRSCASILT
FVNERFEAVL SADGQPGFTA LDPFHDDRGG LCVAALDIAV ADENGKASAE RQRDAEADAI
AELCARLIES HPIVDRRSGS ERPCQPGDIA LLAPTGAELW RYEEALERRG IPVATQAGKG
LFRRQEIQDL IALTRVLADR RDTLALGALL RGPLVGLTEE ELLDIIWGLP RSEERPDRIP
RLDLSIDPAV IAHPLAREVI ERLQSLSRRG NSTTPHELLS HAVDVMRVRP LLLERHRGQA
ERALANIDLY LSLSTGYAVR GLRAFAEAMT AAWSDEARAV EGRPDAQEEA VALFTMHAAK
GLEWPIVIPV NTMTGVMAPD NAVVDRQTET FFCPVLGIPP EGYETAREAE KDELDRERIR
LWYVAATRAR ELLVLPRLDT TPSKSAWIGL VDLSLAELPG LDVSQLPAGL TATGAGVGNT
QTRASFAAEA ETIAAAQTRL TWLAPSRDEN AAGTVLREEE AALWTGSADD QPPELEAAAF
VQGGRERGLI LHKLMEEVLT GETLEAEAAL TERAADLIRA LGRSSVADPA TGLSAQELAA
CVARTLALPD IAALRPGLLA EFPVYAA
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