Gene Mpop_3088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3088 
Symbol 
ID6310954 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3312286 
End bp3312558 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content70% 
IMG OID642651814 
Productconjugal transfer protein TrbB 
Protein accessionYP_001925778 
Protein GI188582333 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACG CCGCCGACGA AGTGCCGGGC TTCACCGTGC CGATTCATCG GGCGCTGACC 
GAGCCGATCC TGCTTGGCGG CGCACCGCGC GCCATCGCGA TCATGAACGG AACACTCGCC
GGCGCAGTCG GCCTCGGCTT GCGGCTCTGG CTGGTCGGTC TTGCGATCTG GGCCATCGGC
CACTTCGCGG CGGTGTGGGC GGCCAAGCGC GATCCCCTCT TCGTCGATGT CGGCCGCCGC
CATCTGCGCA TCCCCGCGCA CCTCACGGTC TGA
 
Protein sequence
MADAADEVPG FTVPIHRALT EPILLGGAPR AIAIMNGTLA GAVGLGLRLW LVGLAIWAIG 
HFAAVWAAKR DPLFVDVGRR HLRIPAHLTV