Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_3042 |
Symbol | |
ID | 6310918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3268402 |
End bp | 3270306 |
Gene Length | 1905 bp |
Protein Length | 634 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 642651768 |
Product | AsmA family protein |
Protein accession | YP_001925732 |
Protein GI | 188582287 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.659116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCTGC GCCGCACCCT CTCCGCCGCC GGACTCGGGC TTCTCGCCCT GGGGCTCGTG GCCGCCTGCC TGCCATGGTC GGTCGAGGCC CCGTCAGCGG CCCGATTCGT GAGCCGGGGC CTGCAGCAGA GCTGGGGCGT GGCGCTCGCG GCACGAGGAC GGACGGAGAT CGTGCTGCTC CCTCTTCCCC GCGTCGTCTT CGAGGATATC CGCCTGACCG AGGGCGATGC TGCCGGGCCG GTGCTGGCCT CGGGCGGGAA CCTGTCGCTC CAGCTCGGGC TGGCCGCCCT GTTCACCGGC CGGGTCGAGG TCGATTCCCT GACGCTTGAC GGCGGGGAGG TGGTGCTGCC GCAGGAGGCG AGCGACACCC GCTGGTCCGC CACGGTCGAG CGCCTGACCC GCAGCATCGC CGGCGAGGTC GGTGACCGGC CCCGCCGCAT CATCCTCGCC CGGTGCGCGG TCAAGGGCCG CGACCCGCGG GACGGTACAC TGCAGACGGC CCGCGACGTC GATCTCACGA TCTCCTGGCC GGCGTGGAGC GAGAGCCTCG CGGTGAGTGG AGGCTTTCAC TGGAACGGCG GCAGCGCCCG GATCACGCTG GCCGGTCTGC GCCCTCACGC GCTGCTGTCG GGGGGCGAGA GCCCGTTCAC CGCCGCCCTG ACCTGGCCGA CGGGTTCGCT GAATGCCGAG GGCAGCGGCA GCCTGCATGA CGGTCTCAAG GCCTCGGGCA CCGGCAGCCT CCAGACCCGC TCCCTGCACC GGACGCTGGC GCTGAGCGGG GGCGGTCTCG CCCTGTCGCC CTTCGTCGAG GATTTCTCGG TGGAGGGCAG CTTCGAGGCG GCCGCGAGCC AGATCCAGTT CCCGAGCGTC ACCGTGCGCA GCGACGGGAA CGTCTTGGAG GGCGCCGGCT CGGCCAGCTT CGGGTCGCCG CGCAACGCGG TGCAGGCGAC CCTTGCCGCC GAAAGCCTCA ATCTCTCGCC GCTGCTCGCC GGCTTCCTGC GCCTGACCGG CTTCGATTCC GCCGACGATC CGGCATGGCG CCGCCAGCCG CTCGACCTGC GGCCGTTCAC CGGAGGCGAC CTCGATCTGC GGATTTCGGC CGGCAATGCC CGGGTCGGGC CGGTGCAACT GACGGATCTC GCCTCCAGCG TTCTCGTGCG CGAGGGCGGC ATCGAAGCCA CCCTCGGCCG TGCCAGCCTG CGCGGTGGCA TGGTCAAGGG CCGCGTCTCC CTCGCGGCCG ACGAGGGCGA CGCCGCCCTC ACACGCGTCA AGGCGCAGGG CAGCTTCGAC GGGCTCGATC TCGGCGCGTT GATGGACGAT CTCGGCCAGC CGCGCTGGCT GCACGGGGCG ACGCGGGGCA GCCTCGCCCT CGAGGGGGCC GGCCACGACG TCGACGCCCT GACCCGCTCG GTCTCGGGCC GCGTCGCCCT GGAGAGCGCC GACGGCGCGC TGTCCGGGCT CGACCTCGCC GACGTGATCC ACCGCGGCGG CGCCGTGGCG CCGGGCGCGC TGGCGCGCCG CAACGGCCGG ACGCCGTTCG AGCATGCCGC CCTGACGCTG CTCTTCGTCG ATGGCATCGG CGAGATCGTC GAGGGCCGGC TCGCATCCCG CACCCTCGGC GCCTCGCTGA ACGGGCGCGT CGCCCTGGCC GACCGCCGCT TCCAGGCGCG AGCGGAACTC CAGTCGCGAA CGGCCCCCTC CGCCGAGGGG GCGACACCGC CCACCACGCT GTTCGAGATC GCCGGTCCCT GGGATGCCGT CAGCGTCCGG GCGAGCGCCG GCCCGCGTCA CGACGGGGAC GAGGCGCGTC AGCGCGCCGC CTCCGACGCC GTCCGCCGAC CCGGCGCGGA CCTCCCGCTC GGCATCCGTG CCTACGCCCC GGCGAACGCG GCCGCGGCCC CCTAG
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Protein sequence | MSLRRTLSAA GLGLLALGLV AACLPWSVEA PSAARFVSRG LQQSWGVALA ARGRTEIVLL PLPRVVFEDI RLTEGDAAGP VLASGGNLSL QLGLAALFTG RVEVDSLTLD GGEVVLPQEA SDTRWSATVE RLTRSIAGEV GDRPRRIILA RCAVKGRDPR DGTLQTARDV DLTISWPAWS ESLAVSGGFH WNGGSARITL AGLRPHALLS GGESPFTAAL TWPTGSLNAE GSGSLHDGLK ASGTGSLQTR SLHRTLALSG GGLALSPFVE DFSVEGSFEA AASQIQFPSV TVRSDGNVLE GAGSASFGSP RNAVQATLAA ESLNLSPLLA GFLRLTGFDS ADDPAWRRQP LDLRPFTGGD LDLRISAGNA RVGPVQLTDL ASSVLVREGG IEATLGRASL RGGMVKGRVS LAADEGDAAL TRVKAQGSFD GLDLGALMDD LGQPRWLHGA TRGSLALEGA GHDVDALTRS VSGRVALESA DGALSGLDLA DVIHRGGAVA PGALARRNGR TPFEHAALTL LFVDGIGEIV EGRLASRTLG ASLNGRVALA DRRFQARAEL QSRTAPSAEG ATPPTTLFEI AGPWDAVSVR ASAGPRHDGD EARQRAASDA VRRPGADLPL GIRAYAPANA AAAP
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