Gene Mpop_3012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_3012 
Symbol 
ID6310808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp3243378 
End bp3244283 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content71% 
IMG OID642651738 
Productcell wall hydrolase SleB 
Protein accessionYP_001925702 
Protein GI188582257 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTACGA GGCGCGTTCG AGGCCTGGGC CTCGGCCCCC GCTGGATCGT CTCGGCCGTG 
GTGCCGTGGA TGCTGGCGAG CGGCCTGCTG GTGTCCTTCA CGGCCACCGC GGGCACCGAC
GCCACGTTGC GGCCCGAGCG CCTCTTCGAA CGGGACGCCG CGGCCGCCGG GTCGCTCGGT
GCCGCGACCG GCTTCAGTCC GGACGTGATC GAGGCCGGGC TGGTCGTGCC GGGAGCCGCG
CACGAAGCGG AGCCGGGCGA GGACGGCCTG CCTGCACTGG CCGATTCCGA CGGTGCCACG
CCCGCCACGC CGCGCGCCGT TGCCCTCTCC TCGGTGACCC CGGCCCCTGC CGACGCGACT
CCGATCGAGG TTGCCGCGGC GAGCCTCGCC CTGCCCGGCT TCACGGCCCG CCTCGATCGC
AACCCGTCGG TGCTGGAGCC GCCGATGTCC TCGCCGGAGG GCAAGTCGCA CTATGCCGAT
CTGATCAACC CGGATGCGAT GGACCGCGAG CAGCGCTGCC TCGCCGAGGC GGTCTATTTC
GAAGCCCGCA GCGAGCCCGA AGAGGGGCAG GCGGCCGTGG CGCAGGTGGT GCTGAACCGC
GTCAAGAGCG GGCTCTATCC GTCCTCGGTC TGCGGCGTCG TCTACCAGAA CCGCCACCGC
TTCATGGGTT GCCAGTTCTC GTTCGCCTGC GAGGGCAAGT CGCTGCGCAT CACCGACGCC
GAGTCCTGGC GCAGCGCCAC CCGCGTCGCC AGCGCGGTGA TCGAGGGCAA GACCTATGTC
AGCGAGGTCG GCGGCGCGAC CCACTACCAT GCCGACTACG TTCGCCCCGG CTGGTCGCGC
CGGCTCAAGC GCAAGGACAT GATCGGCCGG CATATCTTCT ATCAGTTGAA GCCGAACCAG
ACGTGA
 
Protein sequence
MRTRRVRGLG LGPRWIVSAV VPWMLASGLL VSFTATAGTD ATLRPERLFE RDAAAAGSLG 
AATGFSPDVI EAGLVVPGAA HEAEPGEDGL PALADSDGAT PATPRAVALS SVTPAPADAT
PIEVAAASLA LPGFTARLDR NPSVLEPPMS SPEGKSHYAD LINPDAMDRE QRCLAEAVYF
EARSEPEEGQ AAVAQVVLNR VKSGLYPSSV CGVVYQNRHR FMGCQFSFAC EGKSLRITDA
ESWRSATRVA SAVIEGKTYV SEVGGATHYH ADYVRPGWSR RLKRKDMIGR HIFYQLKPNQ
T