Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2821 |
Symbol | |
ID | 6311761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 3027808 |
End bp | 3029490 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642651545 |
Product | NusA antitermination factor |
Protein accession | YP_001925511 |
Protein GI | 188582066 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.143768 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTCG TCAGCGCCAA CCGGCTCGAA CTCCTGCAGA TCGCCGACGC GGTGGCCCGC GAGAAGGTGA TCGACCGCCA GATCGTCATC GAAGCGATGG AGGAGGCGAT CGCCAAGGCG GCCCGCTCCC GCTACGGCGC CGAGACCGAC GTTCACGCCG AGATCGATCC GAAGAGCGGC GCCCTGCGCC TGTCGCGCCA CCTGCTCGTG GTCGATCAGG TCGAGAACGA CGCCCGCGAG ATCACCCTCG ATCAGGCCCG CCGTTACAAT CCCGGCGCGC TGGTCGGCGA CGTGATCTCC GATACCCTGC CGCCCTTCGA TTTCGGCCGC GTCGCCGCGC AATCGGCCAA GCAGGTCATC GTGCAGAAGG TGCGCGATGC CGAGCGCGCC CGCCAGTACG ACGAGTACAA GGACCGGATC GGCGAGATCC TCAACGGCGT GGTCAAGCGC GTCGAGTACG GCAACGTCAT CGTCGATCTC GGCCGCGGCG AGGGCATCGT GCGGCGCGAC GAGATGATTC CGCGCGAGAC CTTCCGCCCC GGCGACCGCA TCCGCGCCTA CCTGTTCGAC GTGCGCTCGG AAGTCCGTGG GCCGCAGATC TTCCTCTCGC GCTCGCACCC GCAATTCATG GCCAAGCTCT TCGGCCAGGA AGTGCCGGAG ATCTACGACG GCATCGTCGA GGTGAAGGCG GTGGCCCGCG ATCCGGGCTC GCGCGCCAAG ATCGCCGTCA TCTCGCGCGA TTCCTCGATC GACCCGGTCG GCGCCTGCGT CGGCATGCGC GGCTCCCGCG TCCAGGCGGT GGTCGGCGAG CTTCAGGGCG AGAAGATCGA CATCATCCCG TGGTCGGAAG ATCAGGCGAC CTTCATCGTC AATGCGCTCC AACCGGCCGA GGTCGTGAAG GTGGTGCTCG ACGAGGAAGC CGACCGCATC GAGGTCGTGG TGCCCGACGA CCAGCTCTCT CTCGCCATCG GCCGCCGCGG CCAGAACGTG CGGCTGGCCT CGCAGCTCAC CGGCTGGGAC ATCGACATCC TGACCGAGGC CGAAGAGTCG GAGCGTCGCC AGAAGGAATT CGCCGAGCGT ACGCAAGTCT TCATGGAGGC GCTCGACGTG GACGAGACCG TCGGCCAGCT GCTGGCGGCG GAAGGCTTCC GTAACGTCGA GGAAATCGCC TTCGTCGACG TGGCGGAACT CTCCAACATC CAGGGCCTCG ACGAGGAAAC CGGTGCCGAG ATCCAGGCGC GCGCGCAGGA CTACCTCGCC CGTATCGAGC AGGAGCAGGA CGACCGGCGC CGCGAGCTCG GCGTCGAGGA CGAACTGCGC GAGATCGACG GCGTGACCAC GGCGATGATG GTGGCGTTGG GCGAGAACGA GGTGAAGACC GTCGAGGATC TCGCCGGCTG CGCCACGGAT GATCTCGTCG GCTACACCGA GGGCCGCGGC CCCGAGGCCG TGCGCCACGC CGGCTACCTC GACGGCTTCG AGCTGTCGCG GGCCGAGGCG GAGGCGCTGA TCATGGCCGC GCGCCTGCAT GCCGGCTGGA TCGAGGCGCT GCCCGAGCCG GAGGGCGAGG CCGCCGACGG CGACGTCACC GAGGCCGACT CGGCCGAGGG TGAAGAGGTC GAAGGTGGCT CGGCCGACGG CGAGGCGACC GAGAAGAGCG CGGCCGAGCC GCAGCAGGCC TGA
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Protein sequence | MAVVSANRLE LLQIADAVAR EKVIDRQIVI EAMEEAIAKA ARSRYGAETD VHAEIDPKSG ALRLSRHLLV VDQVENDARE ITLDQARRYN PGALVGDVIS DTLPPFDFGR VAAQSAKQVI VQKVRDAERA RQYDEYKDRI GEILNGVVKR VEYGNVIVDL GRGEGIVRRD EMIPRETFRP GDRIRAYLFD VRSEVRGPQI FLSRSHPQFM AKLFGQEVPE IYDGIVEVKA VARDPGSRAK IAVISRDSSI DPVGACVGMR GSRVQAVVGE LQGEKIDIIP WSEDQATFIV NALQPAEVVK VVLDEEADRI EVVVPDDQLS LAIGRRGQNV RLASQLTGWD IDILTEAEES ERRQKEFAER TQVFMEALDV DETVGQLLAA EGFRNVEEIA FVDVAELSNI QGLDEETGAE IQARAQDYLA RIEQEQDDRR RELGVEDELR EIDGVTTAMM VALGENEVKT VEDLAGCATD DLVGYTEGRG PEAVRHAGYL DGFELSRAEA EALIMAARLH AGWIEALPEP EGEAADGDVT EADSAEGEEV EGGSADGEAT EKSAAEPQQA
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