Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2564 |
Symbol | |
ID | 6313349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | - |
Start bp | 2793025 |
End bp | 2794554 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642651288 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001925256 |
Protein GI | 188581811 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.430144 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCAGA CGACACCGAT CCACCTGGCG CGGCGACGTG ACCGCGCGCA CCCGGGCGGC CAGGCGAAGG CGTGGGCCGC GACCCTCGTT CTCCTGCCCC TCGCCGTCGG CGGCGGCGCC CTCGCCGGGC TGAAGGCCGG CGAGGCGGGA TGGCCCCTGC CGGCATGGTT CCCAGCCTCG GTCTCCGGTC TGCTCGTCGG TCGCGACGCG AAGCCGGCCG CGGCCGCGGA TGCGCCCGTG CTCTACTACC GCGACCCCGA CGGAAAGGCG GCTTACGCGC TCGCGCCGGC GAGGACGCCC GACGGACGCG CCTACCTTCC GGTGCATGTC GGCGAGGATG TCGACTTCGA GCCGCGGCCC GCGGCGGCGA AGGAGACCGA GGCGAACGCC ACCTACGCCG CGCCCCCGGG TGGAGGCCGG AAGATCCTCT TCTACCGGAA CCCGATGGGC CTGCCCGACA CCTCGCCCGT GCCGAAGAAG GACTCGATGG GGATGGACTA CCTCCCCGTC TACGAGGGCG AGGCCGAGGA CGGGAACACC GTCAAGATCT CGCCCGGCAA GGTCCAGCGC ACCGGCGTGC GCACCGAGCG GGTCGAACGT CGCGTCGTCA GCCGACCGGT GCGGGTCCCC GGCACCGTCA CGCTCGACGA GCGGCGCGTC ACCGTCGTGG CGACACGCTC GGATGCCTAC GTCGACCACG TCGAGAATGT GACGACGGGC GACCGGGTGC GGAAGGGCCA GCCCCTGGTC CACGTCTACT CGCCCGAGAT CAACGCGGCC GCCGCCCAGC TCATCGCAAA TCCCGGCTTC GACGGGGCGC GGCGGCGCCT GCAGAACCTG AACGTCTCGG AGGAGGTGAT CAACGAGATG GAGCGGACCC GGAAGGTGCC GATGGCCATC ACCTGGTCCG CGCCCCGGGA CGGCCTCGTG CTGCAGCGCA CCGCCATCGA GGGCATGAAG GCTGCGGCCG GCGACACCCT GTTCCGGATC GCCGACATCT CGGTGATGTG GGTGCTGGCC GACGTGCCCG AGTACGACCT CGGCAATGTC AAGGTCGGCC AGCCCGTCAG CGTGCGCGTG CGCTCGCTAC CCGGGCGCAG CTTCACCGGC AGGGTCGGGC TGATCTACCC GCAGGTGAAC ACGCAAACCC GCACCACCCG CGTGCGCATC GAGTTGCCGA ACCCCGACGG GGTACTGCTG CCCGACATGT ACGCCGACGT CGAGATCGGG ACCGGGGCGA CGAAGCCTGT CGTCGCGGTC CCGAACGATG CCGTCATCGA CACGGGCGCG CGCCAGGTCG TGCTCGTGGA CAAGGGCGAG GGTCGCTTCG AGCCGCGCGA GGTCAAGGTC GGCGCCCGCG GCGAGGGCTA CACCGAGATC CGCGAGGGTG TGCAGGCCGG CGAGCAAGTC GTGACCGCGG CCAACTTCCT CATAGACGCC GAGAGCAACC TGAAGGCGGC GCTGCAGAGC ATGGCCGCGC CCAAGTCCCC CGCCGAGCCC CGGGCGCAGG CCGAGGAGAA GGCAGAATGA
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Protein sequence | MDQTTPIHLA RRRDRAHPGG QAKAWAATLV LLPLAVGGGA LAGLKAGEAG WPLPAWFPAS VSGLLVGRDA KPAAAADAPV LYYRDPDGKA AYALAPARTP DGRAYLPVHV GEDVDFEPRP AAAKETEANA TYAAPPGGGR KILFYRNPMG LPDTSPVPKK DSMGMDYLPV YEGEAEDGNT VKISPGKVQR TGVRTERVER RVVSRPVRVP GTVTLDERRV TVVATRSDAY VDHVENVTTG DRVRKGQPLV HVYSPEINAA AAQLIANPGF DGARRRLQNL NVSEEVINEM ERTRKVPMAI TWSAPRDGLV LQRTAIEGMK AAAGDTLFRI ADISVMWVLA DVPEYDLGNV KVGQPVSVRV RSLPGRSFTG RVGLIYPQVN TQTRTTRVRI ELPNPDGVLL PDMYADVEIG TGATKPVVAV PNDAVIDTGA RQVVLVDKGE GRFEPREVKV GARGEGYTEI REGVQAGEQV VTAANFLIDA ESNLKAALQS MAAPKSPAEP RAQAEEKAE
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