| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2539 |
|---|
| Symbol | |
|---|
| ID | 6310114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | - |
|---|
| Start bp | 2759312 |
|---|
| End bp | 2761828 |
|---|
| Gene Length | 2517 bp |
|---|
| Protein Length | 838 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 642651263 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001925231 |
|---|
| Protein GI | 188581786 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
|---|
| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.687698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.311305 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAC AAGCGACTGC CGAAGGAGCC AGGCGGAACG GGACGACGTT CGAATTTCCG
GTCCGGGGAA TGAGCTGCGC CTCGTGCGTA GGGCGCGTCG AGACGGCGGT CCGCGCGGTG
GTGGGGGTGC AAGCGGCCAA CGTGAACCTC GCCACCGGAC GCGTCAGCGG CGTCCTGGCT
GCGGGCGCGA GCGACATTGC GGTCGCCGAC GCGGTTCGCG GGGCGGGCTA CGAACCCGTC
GAGGTCGTGA CGGAGCTGCG CGTTTCCGGC ATGACCTGCG CGTCCTGCGT CGGCCGTGTC
GAGCGGGCGC TCGGCCACGT CCCGGGCGTT CGTGACGCCA CCGTGAACCT CGCCACCCAG
CGCGCGTCGG TGCGCCACCT CGGCGGGGCC GGCATGGCCC AACGCATCGT CGCGGCGGTC
GCCGCGGCGG GCTACGAGGC CGAGCCGGTG CGCGACGCCG CGGCGGCCGG CGACCGCGAA
CGGGCGGAGC GCGAGGCGGA GATTGCGGCT TTGCGCCGCT CGGTGCTTCT GGCCGCGCTC
GCCACCGCAC CGCTGCTCGT CTTCGAGATG AGCGCGCACC TCTCCGGCAG CCTGCACGAG
GCTCTGACGA GAACCCTCGG TCAGGGCATG CTCACGCTCC TGTCCCTCGT CTTCGCCAGC
CTCATCCAGT TCGGGCCCGG CTTGCGCTTC TACGCCAAGG GCATCCCGGC CCTCCTGCGC
GGCGCGCCCG ATATGAACAG CCTGGTGATG CTCGGGACCA GCGCGGCCTA CGGCTTCTCG
GTCGTCGCGG CGCTAGCGCC CTGGCTCCTG CCCGCCGGCA CGGCCTACAC CTACTTCGAG
GCGGGCGCCG TGATCGTGAC GCTCATCCTG CTGGGACGAT GGTTCGAGGC CAGGGCAAGG
GGCCGCACGA GCGACGCGAT CCGGCACCTG CTGACGCTCC AGGCGCGGAC GGCCCGGGTC
GTGCGCGACG GGGTCGAGAC GGAGGTCGAC GTCGAGGGGG TCCGTCCCGG CGACGTCGTC
GCCGTGCGGC CCGGCGAGCG CCTGCCCGTC GACGGTACCG TGCTCGACGG CGCCTCCTAC
GTCGACGAGG CGATGGTCAC CGGCGAGCCC GTCCCCGCGC GCAAGGCAAC CGGCGACGAG
GTCATCGGCG GCACCGTGAA CGGCACCGGC AGCTTCCGCT TCCGGGCCAC CAAGGTCGGG
TCCGACACGT TGCTGGCGCA GATCGTGCGC ACCGTCGAGG CGGCGCAAGG GTCGAAGCTG
CCGATCCAGG CCCTCGTCGA CCGGGTGACG ACTTGGTTCG TGCCCGCCGT GCTCGGCGCC
GCGGCCGTCA CGCTCGGGAT CTGGCTCGCC TTCGGCCCGT CTCCCGCCCT GGCCTTCGCG
CTCGCCAACG CGGTCGCGGT GCTGATCATC GCCTGCCCCT GCGCGATGGG CCTCGCGACG
CCGACCTCGA TCATGGTCGG AACCGGCAAG GCGGCCGAGT TCGGCATCCT GTTCCGACGC
GGGGAGGCGC TCCAGGCGCT GCGGGACGCC CGGGTGATCG CGCTCGACAA GACCGGGACG
CTGACCAAGG GCACGCCCGA GCTGACCGAC ATCGCAGTCC TGCCTGGCTT CGACGAGGAC
ACGGTGCTGC GGCTCCTGGC CTCGATGGAG GCGCGCTCGG AACATCCCGT CGCGGCGGCC
ATCGTCGCGG CCGCGCAGCG GCGCGGGGTC CGACTGGCGG AGGCCGTCGG GTTCGAGGCG
ATCCCCGGGT TCGGGGCACG CGCCATGGTC GAGGGACGCC GCGTCGAGGC CGGCGCCGAC
CGCCTCATGC GGCGGCGCGG CCTCGACCTC TCCGCCCTTT CCGGCGCGGC CGAGCGGCTG
GCCGACGACG GTCGGACCCC CCTGTACGTT GCCGTGGATG GTGTCCTGGC GGCCCTGGTC
GCGGTCGCCG ACCCGATCAA GGAGAGCACG CCCGAGGCCA TCGCGGCCCT GCGGCGCCTC
GATGCGCGGG TGGTGATGGT CACCGGCGAC AACCGTCGCA CCGCCGAGGC CGTCGCGCGC
CGTCTCGGCA TCGACGCGGT CGAGGCGGAG GTGCTGCCGA CCGACAAGGC CGACGTCGTG
CGCCGGCTTC AGGTGGATGG GACCGTTCCC GTGGCCTTCG TCGGCGACGG CATCAACGAC
GCCCCCGCGC TCGCGCAGGC CGACGTGGGG TTGGCCATCG GCACCGGAAC GGACATCGCG
GTGGAAAGCG CGGACGTCGT GCTGATGTCC GGCGACCTGC GGAACGTCGC GAACGCCGTC
GCGCTGTCGC GGGCGACCAT CCGCAACATC CGCCAGAACC TGTTCTGGGC CTTCGCCTAC
AACGCCGTGC TGATCCCGGT CGCCGCCGGT GCACTCTATC CGGCCTTCGG CATCCTGATG
TCGCCGCTGT TCGCCGGCCT CGCCATGGCC TTCTCCAGCG TCAGCGTCGT CCTGAACGCT
CTCCGCTTGC GGGCGTTCGC GCCGATGCTC CAGGCCACGA AGGCTGCCGC TTCCTAG
|
|---|
| Protein sequence | MAAQATAEGA RRNGTTFEFP VRGMSCASCV GRVETAVRAV VGVQAANVNL ATGRVSGVLA
AGASDIAVAD AVRGAGYEPV EVVTELRVSG MTCASCVGRV ERALGHVPGV RDATVNLATQ
RASVRHLGGA GMAQRIVAAV AAAGYEAEPV RDAAAAGDRE RAEREAEIAA LRRSVLLAAL
ATAPLLVFEM SAHLSGSLHE ALTRTLGQGM LTLLSLVFAS LIQFGPGLRF YAKGIPALLR
GAPDMNSLVM LGTSAAYGFS VVAALAPWLL PAGTAYTYFE AGAVIVTLIL LGRWFEARAR
GRTSDAIRHL LTLQARTARV VRDGVETEVD VEGVRPGDVV AVRPGERLPV DGTVLDGASY
VDEAMVTGEP VPARKATGDE VIGGTVNGTG SFRFRATKVG SDTLLAQIVR TVEAAQGSKL
PIQALVDRVT TWFVPAVLGA AAVTLGIWLA FGPSPALAFA LANAVAVLII ACPCAMGLAT
PTSIMVGTGK AAEFGILFRR GEALQALRDA RVIALDKTGT LTKGTPELTD IAVLPGFDED
TVLRLLASME ARSEHPVAAA IVAAAQRRGV RLAEAVGFEA IPGFGARAMV EGRRVEAGAD
RLMRRRGLDL SALSGAAERL ADDGRTPLYV AVDGVLAALV AVADPIKEST PEAIAALRRL
DARVVMVTGD NRRTAEAVAR RLGIDAVEAE VLPTDKADVV RRLQVDGTVP VAFVGDGIND
APALAQADVG LAIGTGTDIA VESADVVLMS GDLRNVANAV ALSRATIRNI RQNLFWAFAY
NAVLIPVAAG ALYPAFGILM SPLFAGLAMA FSSVSVVLNA LRLRAFAPML QATKAAAS
|
|---|
| |