Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpop_2447 |
Symbol | |
ID | 6308798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium populi BJ001 |
Kingdom | Bacteria |
Replicon accession | NC_010725 |
Strand | + |
Start bp | 2656541 |
End bp | 2657929 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642651176 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_001925144 |
Protein GI | 188581699 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA GTTCGCCGAT ACGCAGGGAG ACCGCCCGGG AAGTCCGGAC CGCGGATCCG GTGCCGACCG CCCCGGTCCG CCGGCGGAGG AAGTTCGGCC GCTGGATGCT CGCGCTGCTG ATCCTCGGCG GGGCCGGTGC GGTCGCCCAT CGGACCTATG ACGCCCGGCA GAAGCCGGCC GAGGAGACGG CGCAGGCGCC GGGCCCCGGC GGCCATGGCC GCGGCGGGCG GCCGGCCGAG ATGAAGCAGG CGGTCGGCAT CGCGCCGGTG GTGGCCGGCG ACATGCCGGT GGTGCTCCAG GGCCTCGGCA CGGTGACGCC GCTCGCCACG GTCTCGATCC GCTCGCAGAT CAGCGGCTAT CTCACCAAGA TCGGGTTCCG CGAGGGTCAG ATGGTGAAAG AGGGCGATTT CCTCGCCCAG ATCGACCCGC GGCCCTACGA GGCGCTGCTC GCCCAGTACC AGGGCCAGCT CGCCCGCGAT CAGGCGCTGC TGCAGAATTC CAAGCTCGAC CTCCAGCGCT ACCAGACGCT GAACCGGCAG GATTCGATCG CGAAGCAGAA CGTCGACACC CAGGCCGCTC TCGTGAAGCA GAACGAGGGC ACGGTCGCCG CCGACCAGGC GCTGGTCGAT CAGCAGAAGC TGAACCTCAC CTATGCCCGC ATCGTCTCGC CGGTGGAGGG CCGGGTCGGC CTGCGGCAGG TCGATCTCGG CAACTACATC ACTGCCGGCT CGACCAACAT CGTCGTCGTC ACGCAGCTGC GTCCGATCTC GGTGGTGTTC GTGCTGCCGG AGGACGACGT CGCGCGGGTG ATGCGCCGCG TGCGCGAGGG CGCCAAGCTC ACCGTGCGCG CCTTCGACCG CAGCGACCAG CACGAGATCG CCACCGGCCG CCTCGATACC GTGGACAACC AGATCGACAC CACGACCGGC ACGGTGAAGC TGCGGGCGAT GTTCGAGAAC GAGGACGAGA CCCTTTTCCC GAACCAGTTC GTCAACGCGC GGCTGACCGT CGAGACGATC CGGAATGCCC CGTTGGTGCC CAACGCCGCG ATCCTGCGCG GCACGCCGGG CACCTACGTC TACCTGATGG ACGGTGACGA GAAGGTCACG GTCCGCCCGA TCAAGACCGG CGAGACCGAC GGCGTGAACA CGGTGGTGCT GTCGGGTCTG CAGCCCGGCG ACCGCGTCGT CACCGACGGC ACCGACCGCC TGCGCGAGGG TGCGCCCGTG CGGGTCGTCG GTCAGGCCAC CGGTCCCCAA GCCACCGGCC CGGCGGCGGG CGCGCCCGGT GCGACGCTTC CCGCGACGCC CGCGGCCGGC GCGCCGGCCG ATACCGGCTC GACCCAGGGC GGTCAGGAGC GCCGGGGACG CCGGCGCCCG GCACAGTGA
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Protein sequence | MNESSPIRRE TAREVRTADP VPTAPVRRRR KFGRWMLALL ILGGAGAVAH RTYDARQKPA EETAQAPGPG GHGRGGRPAE MKQAVGIAPV VAGDMPVVLQ GLGTVTPLAT VSIRSQISGY LTKIGFREGQ MVKEGDFLAQ IDPRPYEALL AQYQGQLARD QALLQNSKLD LQRYQTLNRQ DSIAKQNVDT QAALVKQNEG TVAADQALVD QQKLNLTYAR IVSPVEGRVG LRQVDLGNYI TAGSTNIVVV TQLRPISVVF VLPEDDVARV MRRVREGAKL TVRAFDRSDQ HEIATGRLDT VDNQIDTTTG TVKLRAMFEN EDETLFPNQF VNARLTVETI RNAPLVPNAA ILRGTPGTYV YLMDGDEKVT VRPIKTGETD GVNTVVLSGL QPGDRVVTDG TDRLREGAPV RVVGQATGPQ ATGPAAGAPG ATLPATPAAG APADTGSTQG GQERRGRRRP AQ
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