Gene Mpop_2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpop_2443 
Symbol 
ID6308794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium populi BJ001 
KingdomBacteria 
Replicon accessionNC_010725 
Strand
Start bp2652844 
End bp2654046 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content67% 
IMG OID642651172 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001925140 
Protein GI188581695 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC ACCTGCGACC CGAACTCGAT GCGGTGCCCG TCACCGCGCC GGGCAACGCG 
CCGCAGATGC GAGCCCTGCC GACCGCCACC CGCCGCGGCC TGTCGCCGCT CAACCGGCGG
CGGCTGGCGA ATTTCCGGGC CAATCGCCGG GGCTACTGGT CGGCGGTGAT CTTCGCCGTC
CTGTTCGTGC TGAGCCTGTT TGCCGAACTC ATCGCCAACG ATCGCCCGAT CGTGATGCAG
TACAAGGGCG AGTGGCTGTT CCCCGTCCTG ATTGACTATC CGGATGAGAA GTTCGGCGGC
TTCCTCGCTC AGACCGACTA CCGTGCGCCC GAGACACGCA AGGAGATCGA GGAGAACGGC
TGGGCGCTCT GGCCGCCGAT TCCCTACGCC GACAACACCT TCATGCGGGA TCTGCCGACC
CCGGCCCCCT CCCCGCCGAC CTGGATGCTG AGCGACGCCG AATGCCGTCC GGTGGCCGAG
CGGGCCGGCG TCAAGGCCGA GGGGCGCGAA CTCGGCTGCC GCGACATCGA GTGGCACTGG
CTCGGCACCG ACAACGCGAC GCGGGACGTG CTGGCGCGGG TGATCTACGG CTTCCGCATC
TCGATCCTGT TCGGCCTCGT GCTCGCCGGC ATCTCCTCGG TCATCGGCGT GATCGCGGGG
GCGGTGCAGG GCTATTTCGG CGGCTGGACC GATCTCACCT TCCAGCGGGT CATCGAGATC
TGGGGCGCGA TCCCCACCCT CTATCTCATC ATCATCATGT CGGCCTTCCT CGTGCCGAGC
TTCTTCACCC TGCTCGGCAT CCTGACGCTG TTCTCGTGGA CGGCGCTCGT CGGCGTGGTG
CGCGCCGAAT TCCTGCGTGC GCGCAATTTC GAATACGTGC GGGCGGCGCG GGCGTTGGGT
CTGTCGAACG TGCGCATCAT GACGCGCCAC CTCCTGCCCA ACGCCATGGT CGCGACCCTG
ACCTTCCTGC CGTTCATCCT GAACGGCTCG GTGACCACGC TCACCTCCCT CGACTATCTC
GGCTTCGGAC TGCCGCCGGG CTCCCCCTCG CTCGGCGAGT TGCTGGCGCA GGGCAAGGAC
AACATCAACG CGCCCTGGCT CGGCCTCACC GGCTTCTTCG TGGTGGCGAC GATGCTGAGC
CTGCTCGTCT TCGCCGGCGA GGCGGTGCGC GACGCGTTCG ATCCGAGAAA GACCTTCGGC
TGA
 
Protein sequence
MNEHLRPELD AVPVTAPGNA PQMRALPTAT RRGLSPLNRR RLANFRANRR GYWSAVIFAV 
LFVLSLFAEL IANDRPIVMQ YKGEWLFPVL IDYPDEKFGG FLAQTDYRAP ETRKEIEENG
WALWPPIPYA DNTFMRDLPT PAPSPPTWML SDAECRPVAE RAGVKAEGRE LGCRDIEWHW
LGTDNATRDV LARVIYGFRI SILFGLVLAG ISSVIGVIAG AVQGYFGGWT DLTFQRVIEI
WGAIPTLYLI IIMSAFLVPS FFTLLGILTL FSWTALVGVV RAEFLRARNF EYVRAARALG
LSNVRIMTRH LLPNAMVATL TFLPFILNGS VTTLTSLDYL GFGLPPGSPS LGELLAQGKD
NINAPWLGLT GFFVVATMLS LLVFAGEAVR DAFDPRKTFG