| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2430 |
|---|
| Symbol | |
|---|
| ID | 6313146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 2640930 |
|---|
| End bp | 2641532 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642651159 |
|---|
| Product | sigma 54 modulation protein/ribosomal protein S30EA |
|---|
| Protein accession | YP_001925127 |
|---|
| Protein GI | 188581682 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
|---|
| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.119151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTT TGCGGGTCAC GGGGCATGGC CTCGATCTCG GTACGGCCCT TCGAGGCCGG
GTCGAAGACC GCATGGCGGC GACGCTTTCG AAGTACCTCG ATCCGCATAT GAGCGGTTCC
TGCACAGGGC ACGTGACGCT GCGGCGCGAC GGGACCGCCT ACCGCACCGA CTGCGTGCTG
CATCTCGTCA CCGGCCTGAC GCTCGAAGCC TCGGGTGCCG CGCACGACGT GCATGCGAGC
TTCGAGCAGA CCGCCGACAA GCTCGAGAAG CGCCTGCGCC GCTACAAGCA CAAGCTCAAG
ACCCACGGCG CGCCGAACCA TAACGGGGCG GATATCGAGG CGGCCTACGC CGTCTTCGCC
GCCCCCGACG AGGATGTCGA CGACGAGCCG GCCGAGGCGG AGGAGGGCGA CCACCCGCCG
GTCGTGGCCG AGAGCACCCG CACCCTCAAG CGCCAGTCGG TGAGCGAGGC CGTGACCGCC
CTCGACATGA CCGGCGCCCC CGTCGTCGTT TTCGTTCACG CTGGCACCGG GCGCATCAAC
GTCGTATATC GGCGCAGTGA CGGCGCCATC GGGTGGGTCG ATCCGCCCGG CGACCGAGGT
TGA
|
|---|
| Protein sequence | MAGLRVTGHG LDLGTALRGR VEDRMAATLS KYLDPHMSGS CTGHVTLRRD GTAYRTDCVL
HLVTGLTLEA SGAAHDVHAS FEQTADKLEK RLRRYKHKLK THGAPNHNGA DIEAAYAVFA
APDEDVDDEP AEAEEGDHPP VVAESTRTLK RQSVSEAVTA LDMTGAPVVV FVHAGTGRIN
VVYRRSDGAI GWVDPPGDRG
|
|---|
| |