| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_2337 |
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| Symbol | |
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| ID | 6314094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium populi BJ001 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010725 |
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| Strand | + |
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| Start bp | 2495881 |
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| End bp | 2498268 |
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| Gene Length | 2388 bp |
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| Protein Length | 795 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642651063 |
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| Product | ribonuclease R |
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| Protein accession | YP_001925034 |
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| Protein GI | 188581589 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.235553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.522411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCAGAC GCATCAATCC GAAGGCGGTT GCCCCCGCTC TTCCCTCCCG CGAGCAGATC
CTCGCCTTCA TCGCCGAGAC GCCCGGAAAG GTTGGCAAGC GCGAGATCGC CAAAGCCTTC
GGCATCTCGG GCGCCGACAA GATCGGCCTC AAGGCGATCC TGAAGGCGAT CGAGGCCGAC
GGCCTGCTCG ACCGCGACCG CGGCGGCTTC CGCAAAAGCG GCAGCCTGCC CGACGTCGTC
CTCGCCGACA TCGTCTCCCG CGATCGCGAC GGCGACCTGA TCGCCCGACC GGCCCAGTGG
GACGGCGAGG GCGAGGCGCC GAAGATCGCC GTCGAGGTGC CGCGTGCCGG CCGCAAGGGC
AACCGCCCGG CGCCCGGCCT CGGCGACCGG GCGCTGATCC GCGTCGCGCC CGACCCCGAG
GCGCCGGGCC GCTATACCGG CCGCGTCATC AAGGTGATCG GCAAGAACCG CACGGACGTG
ATCGGCGTCT ACCGCGCCGG CCGCGACGGC GGACGCCTGC TTCCCGTCGA GAAGAAGTCG
CAGGGCAAGG AGATCGCGAT CCCTGCGGGC GAGGAGGGCG AGGCCCGGGA CGGTGACCTC
GTCAGCGTCG CGGTCGAGCG CGAGACCCGC TTCGGCCTGC CCCGCGGGCG CGTGACCGAG
CGCCTCGGCA CCCTCGGCTC CGAGAAGGCG GTGAGCCTGA TCGCGCTGCA CCTCCATAAC
ATCCCCCACG TCTTCCCTCC GGCTGTGCTG GCGGAGGCGG ATGCGGCCAA GCCCGCGACC
AAGCGCGGCC GCGAGGATTG GCGTCAGGCG CCGCTGGTCA CCATCGACCC GCCCGACGCC
AAGGACCACG ACGACGCGGT GATGGCGCAA CCCGATCCCG ATCCGGCCAA TGCGGGCGGC
TTCATCGTCA CCGTCGCGAT CGCCGACGTG GCGGCCTATG TGCGCCCGGA CTCGGCTCTC
GACCGGGAGG CGCTGCTGCG CGGCAACTCG GTCTACTTCC CGGACCGGGT GGTGCCGATG
CTGCCCGAGC GCATCTCGAA CGACCTCTGC TCCCTGCGCG AGGGCGAGGA CCGCCCGGCG
CTCGCCGTGC GGATGACCAT CGGCGCCGAC GGGGTGAAGC GGAGCCACAG CTTCCACCGC
ATCCTGATGC GCTCGCACGC CAAGCTTGCC TATGCTCAGG CTCAGGCTGC CATCGACGGT
CGGCCGGACG AGACGTCGGG CCCCGTCCTG GAGACGGCGC TGCGCCCGCT CTACGCCGCC
TACGAGGCGA TGAAGCGGGC CCGCGACGCC CGCGGTCCGC TCGCCCTCGA CCTGCCCGAG
CGCAAGGTGC TGCTCAACGC GGAAGGCGGC GTCGATCGGG TGATCGTGCC GGAGCGTCTG
GAGGCGCATC GGCTGATCGA GGAATTCATG ATCCAGGCCA ACGTCGCGGC GGCGGAGACC
CTGGAGAAGG CGGGCTCGCC GCTGATCTAC CGGGTACACG ACGAGCCGGC CCTGGAGAAG
ATGCGCGCGC TCGGAGAGGT GCTCGCCTCC GTCGGCGTCA AGATGACCAA GGCCGGGGCG
CTGCGACCCG ACCTGTTCAA CCGCATCCTG GCCCAGGTGG CCGAGACCGA GCACGCTCCC
TTCATCAACG AGGTGGTGCT GCGTTCGCAG GCACAGGCGA TCTATGCTGC ACAGAATTTA
GGCCATTTCG GCCTGAACCT GCGCCGCTAC GCCCACTTCA CCTCGCCCAT CCGCCGCTAC
GCGGACCTGA TCGTTCACCG CGCCCTGGTG CGTGCCTGCG GATTGGGCAA GGACGGCTTG
GCCGGCGACA CCACGCCGGG CGCCCTCGAC GCCGTGTCCG AGCAGATCTC CGCGGCCGAG
CGCCGGGCGA TGGCGGCGGA GCGCGAGACC ATCGACCGGC TCATCGCCGG CTACCTCGCC
GACCGGGTCG GCGCCACCTT CTCGGGGCGG ATCTCCGGGG TGACGCGATC TGGGCTGTTC
GTGAAGCTCG ACGAGACCGG CGCCGACGGC TTCGTGCCGG TCTCGACCAT CGGCCACGAA
TATTACCGCC ACGACGAGGC CCTGCACGCG CTCGTCGGCG ACCGCAGCGG CGAGACCTAC
CGCCTCGGCG ATACGGTCGA GGTCCGCCTC GTCGAGGCGG CGGCGGTGGC CGGGGCGCTG
CGCTTCGAGA TCCTGTCGGA GGGGCGCAGC CGTTCCGGGG CGAAGGGCGA CGGGCTCAAG
CGGACCGGAT TCAAGGCCGG CGTGAAGGCG AAGGCCAAGG CGCGCATCGG CAAAGGTGCG
GGCAAGGGTT CGGGCAAGGG TTCGGGCAAG GGAGCAGGCA AAGGGCCGGG CAACGGATCG
GCGTCCGAGG GCGAGTCCGC GCGGCGCCAT CGCGGCTCGC GCCGCTGA
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| Protein sequence | MARRINPKAV APALPSREQI LAFIAETPGK VGKREIAKAF GISGADKIGL KAILKAIEAD
GLLDRDRGGF RKSGSLPDVV LADIVSRDRD GDLIARPAQW DGEGEAPKIA VEVPRAGRKG
NRPAPGLGDR ALIRVAPDPE APGRYTGRVI KVIGKNRTDV IGVYRAGRDG GRLLPVEKKS
QGKEIAIPAG EEGEARDGDL VSVAVERETR FGLPRGRVTE RLGTLGSEKA VSLIALHLHN
IPHVFPPAVL AEADAAKPAT KRGREDWRQA PLVTIDPPDA KDHDDAVMAQ PDPDPANAGG
FIVTVAIADV AAYVRPDSAL DREALLRGNS VYFPDRVVPM LPERISNDLC SLREGEDRPA
LAVRMTIGAD GVKRSHSFHR ILMRSHAKLA YAQAQAAIDG RPDETSGPVL ETALRPLYAA
YEAMKRARDA RGPLALDLPE RKVLLNAEGG VDRVIVPERL EAHRLIEEFM IQANVAAAET
LEKAGSPLIY RVHDEPALEK MRALGEVLAS VGVKMTKAGA LRPDLFNRIL AQVAETEHAP
FINEVVLRSQ AQAIYAAQNL GHFGLNLRRY AHFTSPIRRY ADLIVHRALV RACGLGKDGL
AGDTTPGALD AVSEQISAAE RRAMAAERET IDRLIAGYLA DRVGATFSGR ISGVTRSGLF
VKLDETGADG FVPVSTIGHE YYRHDEALHA LVGDRSGETY RLGDTVEVRL VEAAAVAGAL
RFEILSEGRS RSGAKGDGLK RTGFKAGVKA KAKARIGKGA GKGSGKGSGK GAGKGPGNGS
ASEGESARRH RGSRR
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